Analysis of interatomic Contacts of Structural Units in PDB entry:
7MZT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MZT entry

There are 3 chains in PDB entry 7MZT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 309VAL 458
B
 ILE 464GLU 703
I
 GLN 210ILE 347
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 7MZT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
501 505Right-handed alpha
Helix 2
AA2
B
525 531Right-handed alpha
Helix 3
AA3
B
582 586Right-handed 310
Helix 4
AA4
B
616 627Right-handed alpha
Helix 5
AA5
B
693 701Right-handed alpha
Helix 6
AA6
I
212 243Right-handed alpha
Helix 7
AA7
I
253 261Right-handed alpha
Helix 8
AA8
I
262 264Right-handed 310
Helix 9
AA9
I
265 287Right-handed alpha
Helix 10
AB1
I
292 317Right-handed alpha
Helix 11
AB2
I
321 326Right-handed alpha
Helix 12
AB3
I
331 340Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 7MZT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
320 321first strand
Strand 2
A
333 337anti-parallel
Strand 3
A
354 357anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 345first strand
Strand 2
A
350 351anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 389first strand
Strand 2
A
401 406anti-parallel
Strand 3
A
426 429anti-parallel
Strand 4
A
435 437anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 413first strand
Strand 2
A
447 449anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
468 469first strand
Strand 2
B
608 613anti-parallel
Strand 3
B
590 595anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
480 481first strand
Strand 2
B
519 520anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
490 492first strand
Strand 2
B
496 500anti-parallel
Strand 3
B
558 562anti-parallel
Strand 4
B
539 542anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
637 642first strand
Strand 2
B
683 689anti-parallel
Strand 3
B
668 677anti-parallel
Strand 4
B
657 661anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il