Analysis of interatomic Contacts of Structural Units in PDB entry:
7MZW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7MZW entry

There is 1 chain in PDB entry 7MZW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 673PRO 1025
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 7MZW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
697 705Right-handed alpha
Helix 2
AA2
A
717 721Right-handed 310
Helix 3
AA3
A
787 795Right-handed alpha
Helix 4
AA4
A
799 809Right-handed alpha
Helix 5
AA5
A
895 899Right-handed 310
Helix 6
AA6
A
906 913Right-handed alpha
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There are 4 sheets in PDB entry 7MZW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
682 686first strand
Strand 2
A
978 982anti-parallel
Strand 3
A
732 739anti-parallel
Strand 4
A
756 765anti-parallel
Strand 5
A
964 973anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 714first strand
Strand 2
A
724 727anti-parallel
Strand 3
A
770 774anti-parallel
Strand 4
A
825 831anti-parallel
Strand 5
A
834 841anti-parallel
Strand 6
A
956 959anti-parallel
Strand 7
A
860 862parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
996 998first strand
Strand 2
A
1003 1005anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1012 1014first strand
Strand 2
A
1021 1023anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il