Analysis of interatomic Contacts of Structural Units in PDB entry:
7N00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N00 entry

There are 4 chains in PDB entry 7N00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 677ILE 1022
C
 PHE 677ILE 1022
B
 MET 93GLU 149
D
 MET 93GLU 149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7N00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
697 705Right-handed alpha
Helix 2
AA2
A
787 795Right-handed alpha
Helix 3
AA3
A
799 809Right-handed alpha
Helix 4
AA4
A
895 899Right-handed 310
Helix 5
AA5
A
906 913Right-handed alpha
Helix 6
AA6
C
697 705Right-handed alpha
Helix 7
AA7
C
717 721Right-handed 310
Helix 8
AA8
C
787 795Right-handed alpha
Helix 9
AA9
C
799 809Right-handed alpha
Helix 10
AB1
C
895 899Right-handed 310
Helix 11
AB2
C
906 914Right-handed alpha
Helix 12
AB3
B
95 103Right-handed alpha
Helix 13
AB4
B
108 121Right-handed alpha
Helix 14
AB5
B
122 127Right-handed alpha
Helix 15
AB6
B
130 144Right-handed alpha
Helix 16
AB7
B
145 149Right-handed 310
Helix 17
AB8
D
95 103Right-handed alpha
Helix 18
AB9
D
108 121Right-handed alpha
Helix 19
AC1
D
122 127Right-handed alpha
Helix 20
AC2
D
130 144Right-handed alpha
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There are 8 sheets in PDB entry 7N00. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
682 685first strand
Strand 2
A
978 983anti-parallel
Strand 3
A
732 739anti-parallel
Strand 4
A
756 765anti-parallel
Strand 5
A
964 973anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 714first strand
Strand 2
A
724 727anti-parallel
Strand 3
A
770 774anti-parallel
Strand 4
A
825 831anti-parallel
Strand 5
A
834 841anti-parallel
Strand 6
A
957 959anti-parallel
Strand 7
A
861 862parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
995 997first strand
Strand 2
A
1004 1006anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1013 1014first strand
Strand 2
A
1021 1022anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
682 685first strand
Strand 2
C
978 983anti-parallel
Strand 3
C
732 739anti-parallel
Strand 4
C
756 765anti-parallel
Strand 5
C
964 973anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
713 714first strand
Strand 2
C
724 727anti-parallel
Strand 3
C
770 774anti-parallel
Strand 4
C
825 831anti-parallel
Strand 5
C
834 841anti-parallel
Strand 6
C
957 959anti-parallel
Strand 7
C
861 862parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
995 997first strand
Strand 2
C
1004 1006anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1013 1014first strand
Strand 2
C
1021 1022anti-parallel
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