Analysis of interatomic Contacts of Structural Units in PDB entry:
7N0I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7N0I entry

There are 12 chains in PDB entry 7N0I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 269	PRO 364
B	ASN 269	PRO 364
C	ASN 269	PRO 364
D	ASN 269	PRO 364
E	ASN 269	PRO 364
F	ASN 269	PRO 364
H	ASN 269	PRO 364
I	ALA 0	HIS 135
J	ALA 0	HIS 134
K	MET -1	ALA 128
L	MET -1	ALA 129
G	ASN 269	ALA 336

There are 74 helices in PDB entry 7N0I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	269	275	Right-handed alpha
Helix 2	AA2	A	288	295	Right-handed alpha
Helix 3	AA3	A	296	298	Right-handed 310
Helix 4	AA4	A	300	306	Right-handed alpha
Helix 5	AA5	A	310	318	Right-handed alpha
Helix 6	AA6	A	345	357	Right-handed alpha
Helix 7	AA7	A	358	363	Right-handed 310
Helix 8	AA8	B	270	275	Right-handed alpha
Helix 9	AA9	B	288	295	Right-handed alpha
Helix 10	AB1	B	296	298	Right-handed 310
Helix 11	AB2	B	300	306	Right-handed alpha
Helix 12	AB3	B	310	318	Right-handed alpha
Helix 13	AB4	B	345	357	Right-handed alpha
Helix 14	AB5	B	358	363	Right-handed 310
Helix 15	AB6	C	270	274	Right-handed alpha
Helix 16	AB7	C	288	295	Right-handed alpha
Helix 17	AB8	C	296	298	Right-handed 310
Helix 18	AB9	C	300	306	Right-handed alpha
Helix 19	AC1	C	310	318	Right-handed alpha
Helix 20	AC2	C	345	357	Right-handed alpha
Helix 21	AC3	C	358	363	Right-handed 310
Helix 22	AC4	D	270	275	Right-handed alpha
Helix 23	AC5	D	288	295	Right-handed alpha
Helix 24	AC6	D	296	298	Right-handed 310
Helix 25	AC7	D	300	306	Right-handed alpha
Helix 26	AC8	D	310	318	Right-handed alpha
Helix 27	AC9	D	345	357	Right-handed alpha
Helix 28	AD1	D	358	363	Right-handed 310
Helix 29	AD2	E	270	274	Right-handed alpha
Helix 30	AD3	E	288	295	Right-handed alpha
Helix 31	AD4	E	296	298	Right-handed 310
Helix 32	AD5	E	300	306	Right-handed alpha
Helix 33	AD6	E	310	318	Right-handed alpha
Helix 34	AD7	E	345	357	Right-handed alpha
Helix 35	AD8	E	358	363	Right-handed 310
Helix 36	AD9	F	270	275	Right-handed alpha
Helix 37	AE1	F	288	295	Right-handed alpha
Helix 38	AE2	F	296	298	Right-handed 310
Helix 39	AE3	F	300	306	Right-handed alpha
Helix 40	AE4	F	310	318	Right-handed alpha
Helix 41	AE5	F	345	357	Right-handed alpha
Helix 42	AE6	F	358	363	Right-handed 310
Helix 43	AE7	H	270	275	Right-handed alpha
Helix 44	AE8	H	288	294	Right-handed alpha
Helix 45	AE9	H	295	298	Right-handed 310
Helix 46	AF1	H	300	306	Right-handed alpha
Helix 47	AF2	H	310	318	Right-handed alpha
Helix 48	AF3	H	345	357	Right-handed alpha
Helix 49	AF4	H	358	363	Right-handed 310
Helix 50	AF5	I	28	31	Right-handed 310
Helix 51	AF6	I	62	65	Right-handed 310
Helix 52	AF7	I	87	91	Right-handed 310
Helix 53	AF8	I	109	113	Right-handed 310
Helix 54	AF9	I	128	135	Right-handed alpha
Helix 55	AG1	J	28	31	Right-handed 310
Helix 56	AG2	J	62	65	Right-handed 310
Helix 57	AG3	J	87	91	Right-handed 310
Helix 58	AG4	J	109	113	Right-handed 310
Helix 59	AG5	J	128	133	Right-handed alpha
Helix 60	AG6	K	28	31	Right-handed 310
Helix 61	AG7	K	62	65	Right-handed 310
Helix 62	AG8	K	87	91	Right-handed 310
Helix 63	AG9	K	109	113	Right-handed 310
Helix 64	AH1	L	28	31	Right-handed 310
Helix 65	AH2	L	62	65	Right-handed 310
Helix 66	AH3	L	87	91	Right-handed 310
Helix 67	AH4	L	109	113	Right-handed 310
Helix 68	AH5	G	270	275	Right-handed alpha
Helix 69	AH6	G	288	295	Right-handed alpha
Helix 70	AH7	G	296	298	Right-handed 310
Helix 71	AH8	G	300	306	Right-handed alpha
Helix 72	AH9	G	310	318	Right-handed alpha
Helix 73	AI1	G	345	357	Right-handed alpha
Helix 74	AI2	G	358	363	Right-handed 310

There are 16 sheets in PDB entry 7N0I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	319	325	first strand
Strand 2	A	328	338	anti-parallel
Strand 3	B	328	338	anti-parallel
Strand 4	B	319	325	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	319	325	first strand
Strand 2	C	328	338	anti-parallel
Strand 3	D	328	338	anti-parallel
Strand 4	D	319	325	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	319	325	first strand
Strand 2	E	328	338	anti-parallel
Strand 3	F	328	338	anti-parallel
Strand 4	F	319	325	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	319	325	first strand
Strand 2	H	328	338	anti-parallel
Strand 3	G	328	339	anti-parallel
Strand 4	G	319	325	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	2	7	first strand
Strand 2	I	18	26	anti-parallel
Strand 3	I	78	83	anti-parallel
Strand 4	I	68	71	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	12	first strand
Strand 2	I	120	124	parallel
Strand 3	I	92	98	anti-parallel
Strand 4	I	33	39	anti-parallel
Strand 5	I	46	52	anti-parallel
Strand 6	I	58	60	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	12	first strand
Strand 2	I	120	124	parallel
Strand 3	I	92	98	anti-parallel
Strand 4	I	115	116	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	2	7	first strand
Strand 2	J	18	26	anti-parallel
Strand 3	J	78	83	anti-parallel
Strand 4	J	68	71	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	120	124	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	33	39	anti-parallel
Strand 5	J	46	52	anti-parallel
Strand 6	J	58	60	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	120	124	parallel
Strand 3	J	92	99	anti-parallel
Strand 4	J	115	116	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	2	7	first strand
Strand 2	K	18	26	anti-parallel
Strand 3	K	78	83	anti-parallel
Strand 4	K	68	72	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	11	13	first strand
Strand 2	K	120	125	parallel
Strand 3	K	92	99	anti-parallel
Strand 4	K	33	39	anti-parallel
Strand 5	K	46	52	anti-parallel
Strand 6	K	58	60	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	11	13	first strand
Strand 2	K	120	125	parallel
Strand 3	K	92	99	anti-parallel
Strand 4	K	115	116	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	2	7	first strand
Strand 2	L	18	26	anti-parallel
Strand 3	L	78	83	anti-parallel
Strand 4	L	68	72	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	13	first strand
Strand 2	L	120	125	parallel
Strand 3	L	92	99	anti-parallel
Strand 4	L	33	39	anti-parallel
Strand 5	L	46	52	anti-parallel
Strand 6	L	58	60	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	11	13	first strand
Strand 2	L	120	125	parallel
Strand 3	L	92	99	anti-parallel
Strand 4	L	115	116	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7N0I

Analysis of interatomic Contacts of Structural Units in PDB entry:
7N0I