Analysis of interatomic Contacts of Structural Units in PDB entry:
7N0M

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7N0M entry

There are 4 chains in PDB entry 7N0M (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 74	PRO 729
B	ARG 74	PRO 729
C	ARG 74	PRO 729
D	ARG 74	PRO 729

There are112 helices in PDB entry 7N0M. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	76	86	Right-handed alpha
Helix 2	AA2	A	88	93	Right-handed 310
Helix 3	AA3	A	94	102	Right-handed alpha
Helix 4	AA4	A	119	127	Right-handed alpha
Helix 5	AA5	A	135	146	Right-handed alpha
Helix 6	AA6	A	166	174	Right-handed alpha
Helix 7	AA7	A	176	186	Right-handed alpha
Helix 8	AA8	A	212	220	Right-handed alpha
Helix 9	AA9	A	222	231	Right-handed alpha
Helix 10	AB1	A	248	256	Right-handed alpha
Helix 11	AB2	A	262	282	Right-handed alpha
Helix 12	AB3	A	297	305	Right-handed alpha
Helix 13	AB4	A	308	316	Right-handed alpha
Helix 14	AB5	A	355	363	Right-handed alpha
Helix 15	AB6	A	368	375	Right-handed alpha
Helix 16	AB7	A	377	388	Right-handed alpha
Helix 17	AB8	A	389	413	Right-handed alpha
Helix 18	AB9	A	430	459	Right-handed alpha
Helix 19	AC1	A	461	466	Right-handed alpha
Helix 20	AC2	A	470	492	Right-handed alpha
Helix 21	AC3	A	496	512	Right-handed alpha
Helix 22	AC4	A	513	518	Right-handed 310
Helix 23	AC5	A	519	526	Right-handed alpha
Helix 24	AC6	A	526	532	Right-handed alpha
Helix 25	AC7	A	532	559	Right-handed alpha
Helix 26	AC8	A	592	600	Right-handed alpha
Helix 27	AC9	A	619	650	Right-handed alpha
Helix 28	AD1	A	652	672	Right-handed alpha
Helix 29	AD2	B	76	87	Right-handed alpha
Helix 30	AD3	B	88	93	Right-handed 310
Helix 31	AD4	B	94	102	Right-handed alpha
Helix 32	AD5	B	119	127	Right-handed alpha
Helix 33	AD6	B	135	146	Right-handed alpha
Helix 34	AD7	B	166	174	Right-handed alpha
Helix 35	AD8	B	176	186	Right-handed alpha
Helix 36	AD9	B	212	220	Right-handed alpha
Helix 37	AE1	B	222	231	Right-handed alpha
Helix 38	AE2	B	248	256	Right-handed alpha
Helix 39	AE3	B	262	282	Right-handed alpha
Helix 40	AE4	B	297	305	Right-handed alpha
Helix 41	AE5	B	308	316	Right-handed alpha
Helix 42	AE6	B	355	363	Right-handed alpha
Helix 43	AE7	B	368	375	Right-handed alpha
Helix 44	AE8	B	377	388	Right-handed alpha
Helix 45	AE9	B	389	413	Right-handed alpha
Helix 46	AF1	B	430	459	Right-handed alpha
Helix 47	AF2	B	461	466	Right-handed alpha
Helix 48	AF3	B	470	492	Right-handed alpha
Helix 49	AF4	B	496	512	Right-handed alpha
Helix 50	AF5	B	513	518	Right-handed 310
Helix 51	AF6	B	519	526	Right-handed alpha
Helix 52	AF7	B	526	532	Right-handed alpha
Helix 53	AF8	B	532	559	Right-handed alpha
Helix 54	AF9	B	592	600	Right-handed alpha
Helix 55	AG1	B	619	650	Right-handed alpha
Helix 56	AG2	B	652	672	Right-handed alpha
Helix 57	AG3	C	76	86	Right-handed alpha
Helix 58	AG4	C	88	93	Right-handed 310
Helix 59	AG5	C	94	102	Right-handed alpha
Helix 60	AG6	C	119	127	Right-handed alpha
Helix 61	AG7	C	135	146	Right-handed alpha
Helix 62	AG8	C	166	174	Right-handed alpha
Helix 63	AG9	C	176	186	Right-handed alpha
Helix 64	AH1	C	212	220	Right-handed alpha
Helix 65	AH2	C	222	231	Right-handed alpha
Helix 66	AH3	C	248	256	Right-handed alpha
Helix 67	AH4	C	262	282	Right-handed alpha
Helix 68	AH5	C	297	305	Right-handed alpha
Helix 69	AH6	C	308	316	Right-handed alpha
Helix 70	AH7	C	355	363	Right-handed alpha
Helix 71	AH8	C	368	375	Right-handed alpha
Helix 72	AH9	C	377	388	Right-handed alpha
Helix 73	AI1	C	389	413	Right-handed alpha
Helix 74	AI2	C	430	459	Right-handed alpha
Helix 75	AI3	C	461	466	Right-handed alpha
Helix 76	AI4	C	470	492	Right-handed alpha
Helix 77	AI5	C	496	512	Right-handed alpha
Helix 78	AI6	C	513	518	Right-handed 310
Helix 79	AI7	C	519	526	Right-handed alpha
Helix 80	AI8	C	526	532	Right-handed alpha
Helix 81	AI9	C	532	559	Right-handed alpha
Helix 82	AJ1	C	592	600	Right-handed alpha
Helix 83	AJ2	C	619	650	Right-handed alpha
Helix 84	AJ3	C	652	672	Right-handed alpha
Helix 85	AJ4	D	76	87	Right-handed alpha
Helix 86	AJ5	D	88	93	Right-handed 310
Helix 87	AJ6	D	94	102	Right-handed alpha
Helix 88	AJ7	D	119	127	Right-handed alpha
Helix 89	AJ8	D	135	146	Right-handed alpha
Helix 90	AJ9	D	166	174	Right-handed alpha
Helix 91	AK1	D	176	186	Right-handed alpha
Helix 92	AK2	D	212	220	Right-handed alpha
Helix 93	AK3	D	222	231	Right-handed alpha
Helix 94	AK4	D	248	256	Right-handed alpha
Helix 95	AK5	D	262	282	Right-handed alpha
Helix 96	AK6	D	297	305	Right-handed alpha
Helix 97	AK7	D	308	316	Right-handed alpha
Helix 98	AK8	D	355	363	Right-handed alpha
Helix 99	AK9	D	368	375	Right-handed alpha
Helix 100	AL1	D	377	388	Right-handed alpha
Helix 101	AL2	D	389	413	Right-handed alpha
Helix 102	AL3	D	430	459	Right-handed alpha
Helix 103	AL4	D	461	466	Right-handed alpha
Helix 104	AL5	D	470	492	Right-handed alpha
Helix 105	AL6	D	496	512	Right-handed alpha
Helix 106	AL7	D	513	518	Right-handed 310
Helix 107	AL8	D	519	526	Right-handed alpha
Helix 108	AL9	D	526	532	Right-handed alpha
Helix 109	AM1	D	532	559	Right-handed alpha
Helix 110	AM2	D	592	600	Right-handed alpha
Helix 111	AM3	D	619	650	Right-handed alpha
Helix 112	AM4	D	652	672	Right-handed alpha

There are 4 sheets in PDB entry 7N0M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	333	335	first strand
Strand 2	A	338	344	anti-parallel
Strand 3	A	701	710	anti-parallel
Strand 4	A	687	690	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	333	335	first strand
Strand 2	B	338	344	anti-parallel
Strand 3	B	701	710	anti-parallel
Strand 4	B	687	690	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	333	335	first strand
Strand 2	C	338	344	anti-parallel
Strand 3	C	701	710	anti-parallel
Strand 4	C	687	690	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	333	335	first strand
Strand 2	D	338	344	anti-parallel
Strand 3	D	701	710	anti-parallel
Strand 4	D	687	690	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7N0M

Analysis of interatomic Contacts of Structural Units in PDB entry:
7N0M