Analysis of interatomic Contacts of Structural Units in PDB entry:
7N16

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7N16 entry

There are 4 chains in PDB entry 7N16 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ARG 104	ASP 620
A	ARG 104	ASP 620
B	ARG 104	ASP 620
C	ARG 104	ASP 620

There are 72 helices in PDB entry 7N16. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	104	111	Right-handed alpha
Helix 2	AA2	D	119	145	Right-handed alpha
Helix 3	AA3	D	197	224	Right-handed alpha
Helix 4	AA4	D	236	247	Right-handed alpha
Helix 5	AA5	D	248	256	Right-handed alpha
Helix 6	AA6	D	257	262	Right-handed 310
Helix 7	AA7	D	276	285	Right-handed 310
Helix 8	AA8	D	286	301	Right-handed alpha
Helix 9	AA9	D	303	335	Right-handed alpha
Helix 10	AB1	D	358	375	Right-handed alpha
Helix 11	AB2	D	385	418	Right-handed alpha
Helix 12	AB3	D	418	439	Right-handed alpha
Helix 13	AB4	D	441	458	Right-handed alpha
Helix 14	AB5	D	464	470	Right-handed alpha
Helix 15	AB6	D	472	489	Right-handed alpha
Helix 16	AB7	D	498	507	Right-handed alpha
Helix 17	AB8	D	592	601	Right-handed alpha
Helix 18	AB9	D	602	620	Right-handed alpha
Helix 19	AC1	A	105	111	Right-handed alpha
Helix 20	AC2	A	119	145	Right-handed alpha
Helix 21	AC3	A	197	224	Right-handed alpha
Helix 22	AC4	A	236	247	Right-handed alpha
Helix 23	AC5	A	248	256	Right-handed alpha
Helix 24	AC6	A	257	262	Right-handed 310
Helix 25	AC7	A	276	285	Right-handed 310
Helix 26	AC8	A	286	301	Right-handed alpha
Helix 27	AC9	A	303	335	Right-handed alpha
Helix 28	AD1	A	358	375	Right-handed alpha
Helix 29	AD2	A	385	418	Right-handed alpha
Helix 30	AD3	A	418	439	Right-handed alpha
Helix 31	AD4	A	441	458	Right-handed alpha
Helix 32	AD5	A	464	470	Right-handed alpha
Helix 33	AD6	A	472	489	Right-handed alpha
Helix 34	AD7	A	498	507	Right-handed alpha
Helix 35	AD8	A	592	601	Right-handed alpha
Helix 36	AD9	A	602	620	Right-handed alpha
Helix 37	AE1	B	105	111	Right-handed alpha
Helix 38	AE2	B	119	145	Right-handed alpha
Helix 39	AE3	B	197	224	Right-handed alpha
Helix 40	AE4	B	236	247	Right-handed alpha
Helix 41	AE5	B	248	256	Right-handed alpha
Helix 42	AE6	B	257	262	Right-handed 310
Helix 43	AE7	B	276	285	Right-handed 310
Helix 44	AE8	B	286	301	Right-handed alpha
Helix 45	AE9	B	303	335	Right-handed alpha
Helix 46	AF1	B	358	375	Right-handed alpha
Helix 47	AF2	B	385	418	Right-handed alpha
Helix 48	AF3	B	418	439	Right-handed alpha
Helix 49	AF4	B	441	458	Right-handed alpha
Helix 50	AF5	B	464	470	Right-handed alpha
Helix 51	AF6	B	472	489	Right-handed alpha
Helix 52	AF7	B	498	507	Right-handed alpha
Helix 53	AF8	B	592	601	Right-handed alpha
Helix 54	AF9	B	602	620	Right-handed alpha
Helix 55	AG1	C	105	111	Right-handed alpha
Helix 56	AG2	C	119	145	Right-handed alpha
Helix 57	AG3	C	197	224	Right-handed alpha
Helix 58	AG4	C	236	247	Right-handed alpha
Helix 59	AG5	C	248	256	Right-handed alpha
Helix 60	AG6	C	257	262	Right-handed 310
Helix 61	AG7	C	276	285	Right-handed 310
Helix 62	AG8	C	286	301	Right-handed alpha
Helix 63	AG9	C	303	335	Right-handed alpha
Helix 64	AH1	C	358	375	Right-handed alpha
Helix 65	AH2	C	385	418	Right-handed alpha
Helix 66	AH3	C	418	439	Right-handed alpha
Helix 67	AH4	C	441	458	Right-handed alpha
Helix 68	AH5	C	464	470	Right-handed alpha
Helix 69	AH6	C	472	489	Right-handed alpha
Helix 70	AH7	C	498	507	Right-handed alpha
Helix 71	AH8	C	592	601	Right-handed alpha
Helix 72	AH9	C	602	620	Right-handed alpha

There are 12 sheets in PDB entry 7N16. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	167	171	first strand
Strand 2	D	153	160	anti-parallel
Strand 3	D	185	188	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	510	514	first strand
Strand 2	D	585	591	anti-parallel
Strand 3	D	529	534	anti-parallel
Strand 4	D	557	558	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	519	521	first strand
Strand 2	D	579	581	anti-parallel
Strand 3	D	538	541	anti-parallel
Strand 4	D	547	552	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	171	first strand
Strand 2	A	153	160	anti-parallel
Strand 3	A	185	188	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	510	514	first strand
Strand 2	A	585	591	anti-parallel
Strand 3	A	529	534	anti-parallel
Strand 4	A	557	558	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	519	521	first strand
Strand 2	A	579	581	anti-parallel
Strand 3	A	538	541	anti-parallel
Strand 4	A	547	552	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	171	first strand
Strand 2	B	153	160	anti-parallel
Strand 3	B	185	188	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	510	514	first strand
Strand 2	B	585	591	anti-parallel
Strand 3	B	529	534	anti-parallel
Strand 4	B	557	558	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	519	521	first strand
Strand 2	B	579	581	anti-parallel
Strand 3	B	538	541	anti-parallel
Strand 4	B	547	552	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	171	first strand
Strand 2	C	153	160	anti-parallel
Strand 3	C	185	188	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	510	514	first strand
Strand 2	C	585	591	anti-parallel
Strand 3	C	529	534	anti-parallel
Strand 4	C	557	558	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	519	521	first strand
Strand 2	C	579	581	anti-parallel
Strand 3	C	538	541	anti-parallel
Strand 4	C	547	552	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7N16

Analysis of interatomic Contacts of Structural Units in PDB entry:
7N16