Analysis of interatomic Contacts of Structural Units in PDB entry:
7N2M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N2M entry

There are 3 chains in PDB entry 7N2M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 338THR 1244
B
 G 1 C 11
C
 A 109 C 121
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7N2M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
409 420Right-handed alpha
Helix 2
AA2
A
420 426Right-handed alpha
Helix 3
AA3
A
482 491Right-handed alpha
Helix 4
AA4
A
522 524Right-handed 310
Helix 5
AA5
A
597 606Right-handed alpha
Helix 6
AA6
A
614 630Right-handed alpha
Helix 7
AA7
A
642 654Right-handed alpha
Helix 8
AA8
A
658 663Right-handed 310
Helix 9
AA9
A
679 685Right-handed alpha
Helix 10
AB1
A
693 701Right-handed alpha
Helix 11
AB2
A
707 717Right-handed alpha
Helix 12
AB3
A
724 734Right-handed alpha
Helix 13
AB4
A
734 760Right-handed alpha
Helix 14
AB5
A
760 773Right-handed alpha
Helix 15
AB6
A
775 780Right-handed alpha
Helix 16
AB7
A
784 799Right-handed alpha
Helix 17
AB8
A
863 872Right-handed alpha
Helix 18
AB9
A
909 931Right-handed alpha
Helix 19
AC1
A
935 959Right-handed alpha
Helix 20
AC2
A
960 962Right-handed 310
Helix 21
AC3
A
969 994Right-handed alpha
Helix 22
AC4
A
1014 1031Right-handed alpha
Helix 23
AC5
A
1077 1081Right-handed 310
Helix 24
AC6
A
1085 1100Right-handed alpha
Helix 25
AC7
A
1104 1125Right-handed alpha
Helix 26
AC8
A
1129 1134Right-handed 310
Helix 27
AC9
A
1142 1146Right-handed 310
Helix 28
AD1
A
1148 1151Right-handed 310
Helix 29
AD2
A
1152 1165Right-handed alpha
Helix 30
AD3
A
1187 1190Right-handed 310
Helix 31
AD4
A
1194 1201Right-handed alpha
Helix 32
AD5
A
1207 1215Right-handed alpha
Helix 33
AD6
A
1215 1225Right-handed alpha
Helix 34
AD7
A
1231 1239Right-handed alpha
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There are 8 sheets in PDB entry 7N2M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
516 520first strand
Strand 2
A
372 380parallel
Strand 3
A
359 367anti-parallel
Strand 4
A
340 350anti-parallel
Strand 5
A
497 502anti-parallel
Strand 6
A
526 529anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 438first strand
Strand 2
A
449 457anti-parallel
Strand 3
A
385 391anti-parallel
Strand 4
A
473 477anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 397first strand
Strand 2
A
402 407anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 611first strand
Strand 2
A
581 586parallel
Strand 3
A
555 568anti-parallel
Strand 4
A
537 548anti-parallel
Strand 5
A
633 636parallel
Strand 6
A
689 692parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
850 852first strand
Strand 2
A
1038 1051anti-parallel
Strand 3
A
856 861anti-parallel
Strand 4
A
1005 1009anti-parallel
Strand 5
A
997 1000anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
850 852first strand
Strand 2
A
1038 1051anti-parallel
Strand 3
A
1054 1062anti-parallel
Strand 4
A
1068 1075anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1135 1138first strand
Strand 2
A
1174 1181anti-parallel
Strand 3
A
1192 1193anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1135 1138first strand
Strand 2
A
1174 1181anti-parallel
Strand 3
A
1205 1206anti-parallel
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