Analysis of interatomic Contacts of Structural Units in PDB entry:
7N3N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N3N entry

There are 2 chains in PDB entry 7N3N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 286LEU 1208
B
 TRP 287PHE 1210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 7N3N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
287 300Right-handed alpha
Helix 2
AA2
A
301 306Right-handed alpha
Helix 3
AA3
A
307 315Right-handed alpha
Helix 4
AA4
A
316 344Right-handed alpha
Helix 5
AA5
A
351 359Right-handed alpha
Helix 6
AA6
A
361 399Right-handed alpha
Helix 7
AA7
A
404 425Right-handed alpha
Helix 8
AA8
A
428 453Right-handed alpha
Helix 9
AA9
A
469 476Right-handed alpha
Helix 10
AB1
A
486 499Right-handed alpha
Helix 11
AB2
A
501 506Right-handed alpha
Helix 12
AB3
A
517 542Right-handed alpha
Helix 13
AB4
A
591 596Right-handed alpha
Helix 14
AB5
A
599 633Right-handed alpha
Helix 15
AB6
A
635 642Right-handed 310
Helix 16
AB7
A
651 667Right-handed alpha
Helix 17
AB8
A
673 700Right-handed alpha
Helix 18
AB9
A
712 730Right-handed alpha
Helix 19
AC1
A
731 752Right-handed alpha
Helix 20
AC2
A
763 779Right-handed alpha
Helix 21
AC3
A
801 813Right-handed alpha
Helix 22
AC4
A
830 849Right-handed alpha
Helix 23
AC5
A
862 874Right-handed alpha
Helix 24
AC6
A
896 913Right-handed alpha
Helix 25
AC7
A
1034 1045Right-handed alpha
Helix 26
AC8
A
1064 1080Right-handed alpha
Helix 27
AC9
A
1097 1109Right-handed alpha
Helix 28
AD1
A
1119 1130Right-handed alpha
Helix 29
AD2
A
1136 1142Right-handed alpha
Helix 30
AD3
A
1142 1160Right-handed alpha
Helix 31
AD4
A
1179 1191Right-handed alpha
Helix 32
AD5
B
288 300Right-handed alpha
Helix 33
AD6
B
301 304Right-handed 310
Helix 34
AD7
B
305 315Right-handed alpha
Helix 35
AD8
B
316 344Right-handed alpha
Helix 36
AD9
B
351 360Right-handed alpha
Helix 37
AE1
B
361 398Right-handed alpha
Helix 38
AE2
B
404 425Right-handed alpha
Helix 39
AE3
B
427 454Right-handed alpha
Helix 40
AE4
B
469 478Right-handed alpha
Helix 41
AE5
B
486 495Right-handed alpha
Helix 42
AE6
B
500 506Right-handed alpha
Helix 43
AE7
B
516 544Right-handed alpha
Helix 44
AE8
B
565 569Right-handed 310
Helix 45
AE9
B
591 597Right-handed alpha
Helix 46
AF1
B
599 632Right-handed alpha
Helix 47
AF2
B
636 642Right-handed 310
Helix 48
AF3
B
651 667Right-handed alpha
Helix 49
AF4
B
670 699Right-handed alpha
Helix 50
AF5
B
712 731Right-handed alpha
Helix 51
AF6
B
731 751Right-handed alpha
Helix 52
AF7
B
763 779Right-handed alpha
Helix 53
AF8
B
801 811Right-handed alpha
Helix 54
AF9
B
830 849Right-handed alpha
Helix 55
AG1
B
862 874Right-handed alpha
Helix 56
AG2
B
896 913Right-handed alpha
Helix 57
AG3
B
1034 1045Right-handed alpha
Helix 58
AG4
B
1064 1079Right-handed alpha
Helix 59
AG5
B
1097 1109Right-handed alpha
Helix 60
AG6
B
1119 1130Right-handed alpha
Helix 61
AG7
B
1136 1142Right-handed alpha
Helix 62
AG8
B
1142 1160Right-handed alpha
Helix 63
AG9
B
1179 1191Right-handed alpha
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There are 4 sheets in PDB entry 7N3N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
854 859first strand
Strand 2
A
818 824parallel
Strand 3
A
791 794parallel
Strand 4
A
883 887parallel
Strand 5
A
916 921parallel
Strand 6
A
1197 1201anti-parallel
Strand 7
A
1165 1168parallel
Strand 8
A
1023 1028parallel
Strand 9
A
1053 1058parallel
Strand 10
A
1085 1088parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1112 1113first strand
Strand 2
A
1134 1135parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
856 859first strand
Strand 2
B
818 824parallel
Strand 3
B
791 794parallel
Strand 4
B
883 887parallel
Strand 5
B
916 920parallel
Strand 6
B
1197 1201anti-parallel
Strand 7
B
1165 1169parallel
Strand 8
B
1024 1028parallel
Strand 9
B
1055 1058parallel
Strand 10
B
1085 1088parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1112 1113first strand
Strand 2
B
1134 1135parallel
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