Analysis of interatomic Contacts of Structural Units in PDB entry:
7N4X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N4X entry

There is 1 chain in PDB entry 7N4X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 333ALA 1285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 7N4X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
333 351Right-handed alpha
Helix 2
AA2
A
351 368Right-handed alpha
Helix 3
AA3
A
369 373Right-handed 310
Helix 4
AA4
A
378 384Right-handed alpha
Helix 5
AA5
A
388 401Right-handed alpha
Helix 6
AA6
A
437 453Right-handed alpha
Helix 7
AA7
A
466 470Right-handed 310
Helix 8
AA8
A
481 485Right-handed 310
Helix 9
AA9
A
491 493Right-handed 310
Helix 10
AB1
A
497 502Right-handed alpha
Helix 11
AB2
A
517 528Right-handed alpha
Helix 12
AB3
A
551 555Right-handed alpha
Helix 13
AB4
A
563 567Right-handed 310
Helix 14
AB5
A
585 607Right-handed alpha
Helix 15
AB6
A
619 630Right-handed alpha
Helix 16
AB7
A
632 649Right-handed alpha
Helix 17
AB8
A
659 664Right-handed alpha
Helix 18
AB9
A
665 690Right-handed alpha
Helix 19
AC1
A
701 724Right-handed alpha
Helix 20
AC2
A
731 762Right-handed alpha
Helix 21
AC3
A
766 804Right-handed alpha
Helix 22
AC4
A
826 835Right-handed alpha
Helix 23
AC5
A
835 841Right-handed alpha
Helix 24
AC6
A
842 864Right-handed alpha
Helix 25
AC7
A
865 867Right-handed 310
Helix 26
AC8
A
881 893Right-handed alpha
Helix 27
AC9
A
912 918Right-handed alpha
Helix 28
AD1
A
929 939Right-handed alpha
Helix 29
AD2
A
952 961Right-handed alpha
Helix 30
AD3
A
1004 1017Right-handed alpha
Helix 31
AD4
A
1058 1081Right-handed alpha
Helix 32
AD5
A
1103 1107Right-handed 310
Helix 33
AD6
A
1108 1130Right-handed alpha
Helix 34
AD7
A
1134 1160Right-handed alpha
Helix 35
AD8
A
1164 1178Right-handed alpha
Helix 36
AD9
A
1178 1191Right-handed alpha
Helix 37
AE1
A
1196 1225Right-handed alpha
Helix 38
AE2
A
1226 1230Right-handed 310
Helix 39
AE3
A
1232 1239Right-handed alpha
Helix 40
AE4
A
1240 1254Right-handed alpha
Helix 41
AE5
A
1256 1266Right-handed alpha
Helix 42
AE6
A
1270 1276Right-handed alpha
Helix 43
AE7
A
1277 1282Right-handed alpha
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There are 8 sheets in PDB entry 7N4X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
487 489first strand
Strand 2
A
569 576anti-parallel
Strand 3
A
556 557anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
487 489first strand
Strand 2
A
569 576anti-parallel
Strand 3
A
406 412anti-parallel
Strand 4
A
614 616anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 423first strand
Strand 2
A
429 432anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 457first strand
Strand 2
A
464 465anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
505 509first strand
Strand 2
A
512 516anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1050 1052first strand
Strand 2
A
899 904anti-parallel
Strand 3
A
1092 1095anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
979 980first strand
Strand 2
A
968 969anti-parallel
Strand 3
A
991 992anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1036 1038first strand
Strand 2
A
1044 1047anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il