Analysis of interatomic Contacts of Structural Units in PDB entry:
7N59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N59 entry

There are 2 chains in PDB entry 7N59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 117SER 716
B
 ALA 117SER 716
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 7N59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
117 133Right-handed alpha
Helix 2
AA2
A
136 175Right-handed alpha
Helix 3
AA3
A
197 243Right-handed alpha
Helix 4
AA4
A
246 253Right-handed alpha
Helix 5
AA5
A
256 279Right-handed alpha
Helix 6
AA6
A
279 294Right-handed alpha
Helix 7
AA7
A
300 348Right-handed alpha
Helix 8
AA8
A
348 355Right-handed alpha
Helix 9
AA9
A
359 412Right-handed alpha
Helix 10
AB1
A
418 431Right-handed alpha
Helix 11
AB2
A
432 434Right-handed 310
Helix 12
AB3
A
435 457Right-handed alpha
Helix 13
AB4
A
513 517Right-handed 310
Helix 14
AB5
A
520 526Right-handed alpha
Helix 15
AB6
A
547 554Right-handed alpha
Helix 16
AB7
A
568 575Right-handed alpha
Helix 17
AB8
A
581 592Right-handed alpha
Helix 18
AB9
A
594 599Right-handed alpha
Helix 19
AC1
A
617 633Right-handed alpha
Helix 20
AC2
A
647 662Right-handed alpha
Helix 21
AC3
A
673 677Right-handed 310
Helix 22
AC4
A
696 704Right-handed alpha
Helix 23
AC5
A
705 713Right-handed alpha
Helix 24
AC6
B
118 133Right-handed alpha
Helix 25
AC7
B
136 175Right-handed alpha
Helix 26
AC8
B
197 245Right-handed alpha
Helix 27
AC9
B
246 253Right-handed alpha
Helix 28
AD1
B
256 279Right-handed alpha
Helix 29
AD2
B
279 296Right-handed alpha
Helix 30
AD3
B
300 348Right-handed alpha
Helix 31
AD4
B
348 355Right-handed alpha
Helix 32
AD5
B
360 412Right-handed alpha
Helix 33
AD6
B
417 431Right-handed alpha
Helix 34
AD7
B
432 434Right-handed 310
Helix 35
AD8
B
435 457Right-handed alpha
Helix 36
AD9
B
513 517Right-handed 310
Helix 37
AE1
B
520 526Right-handed alpha
Helix 38
AE2
B
547 554Right-handed alpha
Helix 39
AE3
B
568 575Right-handed alpha
Helix 40
AE4
B
581 592Right-handed alpha
Helix 41
AE5
B
594 600Right-handed alpha
Helix 42
AE6
B
617 633Right-handed alpha
Helix 43
AE7
B
647 662Right-handed alpha
Helix 44
AE8
B
673 680Right-handed 310
Helix 45
AE9
B
696 704Right-handed alpha
Helix 46
AF1
B
705 713Right-handed alpha
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There are 6 sheets in PDB entry 7N59. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
495 498first strand
Strand 2
A
479 486anti-parallel
Strand 3
A
501 502anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
495 498first strand
Strand 2
A
479 486anti-parallel
Strand 3
A
533 538anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 557first strand
Strand 2
A
636 639parallel
Strand 3
A
666 670parallel
Strand 4
A
507 511parallel
Strand 5
A
682 686parallel
Strand 6
A
691 695anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
495 498first strand
Strand 2
B
479 486anti-parallel
Strand 3
B
501 502anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
495 498first strand
Strand 2
B
479 486anti-parallel
Strand 3
B
533 538anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
555 557first strand
Strand 2
B
636 639parallel
Strand 3
B
666 670parallel
Strand 4
B
507 511parallel
Strand 5
B
682 687parallel
Strand 6
B
690 695anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il