Analysis of interatomic Contacts of Structural Units in PDB entry:
7N5B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N5B entry

There are 2 chains in PDB entry 7N5B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 117SER 716
B
 ALA 117SER 716
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 7N5B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
117 132Right-handed alpha
Helix 2
AA2
A
136 174Right-handed alpha
Helix 3
AA3
A
196 245Right-handed alpha
Helix 4
AA4
A
256 279Right-handed alpha
Helix 5
AA5
A
279 296Right-handed alpha
Helix 6
AA6
A
301 348Right-handed alpha
Helix 7
AA7
A
348 355Right-handed alpha
Helix 8
AA8
A
358 408Right-handed alpha
Helix 9
AA9
A
415 458Right-handed alpha
Helix 10
AB1
A
513 517Right-handed 310
Helix 11
AB2
A
518 526Right-handed alpha
Helix 12
AB3
A
547 554Right-handed alpha
Helix 13
AB4
A
568 575Right-handed alpha
Helix 14
AB5
A
581 592Right-handed alpha
Helix 15
AB6
A
594 600Right-handed alpha
Helix 16
AB7
A
610 614Right-handed 310
Helix 17
AB8
A
617 633Right-handed alpha
Helix 18
AB9
A
647 662Right-handed alpha
Helix 19
AC1
A
673 679Right-handed alpha
Helix 20
AC2
A
696 704Right-handed alpha
Helix 21
AC3
A
705 716Right-handed alpha
Helix 22
AC4
B
118 132Right-handed alpha
Helix 23
AC5
B
136 174Right-handed alpha
Helix 24
AC6
B
196 245Right-handed alpha
Helix 25
AC7
B
256 279Right-handed alpha
Helix 26
AC8
B
279 296Right-handed alpha
Helix 27
AC9
B
301 348Right-handed alpha
Helix 28
AD1
B
348 355Right-handed alpha
Helix 29
AD2
B
358 408Right-handed alpha
Helix 30
AD3
B
415 458Right-handed alpha
Helix 31
AD4
B
513 517Right-handed 310
Helix 32
AD5
B
518 526Right-handed alpha
Helix 33
AD6
B
547 554Right-handed alpha
Helix 34
AD7
B
568 575Right-handed alpha
Helix 35
AD8
B
581 592Right-handed alpha
Helix 36
AD9
B
594 600Right-handed alpha
Helix 37
AE1
B
610 614Right-handed 310
Helix 38
AE2
B
617 633Right-handed alpha
Helix 39
AE3
B
647 662Right-handed alpha
Helix 40
AE4
B
673 679Right-handed alpha
Helix 41
AE5
B
696 704Right-handed alpha
Helix 42
AE6
B
705 716Right-handed alpha
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There are 6 sheets in PDB entry 7N5B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 502first strand
Strand 2
A
479 482anti-parallel
Strand 3
A
535 538anti-parallel
Strand 4
A
541 542anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 486first strand
Strand 2
A
495 498anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 558first strand
Strand 2
A
636 640parallel
Strand 3
A
667 670parallel
Strand 4
A
507 511parallel
Strand 5
A
682 687parallel
Strand 6
A
690 695anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
501 502first strand
Strand 2
B
479 482anti-parallel
Strand 3
B
535 538anti-parallel
Strand 4
B
541 542anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
484 486first strand
Strand 2
B
495 498anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
555 558first strand
Strand 2
B
636 640parallel
Strand 3
B
667 670parallel
Strand 4
B
507 511parallel
Strand 5
B
682 687parallel
Strand 6
B
690 695anti-parallel
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