Analysis of interatomic Contacts of Structural Units in PDB entry:
7N5G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N5G entry

There is 1 chain in PDB entry 7N5G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
LEU 186ASN 751
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7N5G. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
B
186 203Right-handed alpha
Helix 2
AA2
B
223 232Right-handed alpha
Helix 3
AA3
B
235 241Right-handed alpha
Helix 4
AA4
B
265 285Right-handed alpha
Helix 5
AA5
B
295 329Right-handed alpha
Helix 6
AA6
B
330 331Right-handed 310
Helix 7
AA7
B
332 334Right-handed 310
Helix 8
AA8
B
335 349Right-handed alpha
Helix 9
AA9
B
508 524Right-handed alpha
Helix 10
AB1
B
526 552Right-handed alpha
Helix 11
AB2
B
556 590Right-handed alpha
Helix 12
AB3
B
631 635Right-handed alpha
Helix 13
AB4
B
661 678Right-handed alpha
Helix 14
AB5
B
714 737Right-handed alpha
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There are 2 sheets in PDB entry 7N5G. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
626 630first strand
Strand 2
B
616 620anti-parallel
Strand 3
B
605 612anti-parallel
Strand 4
B
599 602anti-parallel
Strand 5
B
639 641anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
649 657first strand
Strand 2
B
699 707anti-parallel
Strand 3
B
688 695anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il