Analysis of interatomic Contacts of Structural Units in PDB entry:
7N63


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N63 entry

There is 1 chain in PDB entry 7N63 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7N63. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 13Right-handed alpha
Helix 2
AA2
A
14 29Right-handed alpha
Helix 3
AA3
A
34 49Right-handed alpha
Helix 4
AA4
A
58 71Right-handed alpha
Helix 5
AA5
A
85 95Right-handed alpha
Helix 6
AA6
A
112 120Right-handed 310
Helix 7
AA7
A
132 135Right-handed 310
Helix 8
AA8
A
139 149Right-handed alpha
Helix 9
AA9
A
200 212Right-handed alpha
Helix 10
AB1
A
231 243Right-handed alpha
Helix 11
AB2
A
244 263Right-handed alpha
Helix 12
AB3
A
275 279Right-handed 310
Helix 13
AB4
A
290 301Right-handed alpha
Helix 14
AB5
A
312 323Right-handed 310
Helix 15
AB6
A
327 336Right-handed alpha
Helix 16
AB7
A
347 360Right-handed alpha
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There are 3 sheets in PDB entry 7N63. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 56first strand
Strand 2
A
194 198anti-parallel
Strand 3
A
176 180anti-parallel
Strand 4
A
152 156parallel
Strand 5
A
124 130parallel
Strand 6
A
77 81parallel
Strand 7
A
98 102parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
168 169anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 287first strand
Strand 2
A
337 340anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il