Analysis of interatomic Contacts of Structural Units in PDB entry:
7N6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N6B entry

There is 1 chain in PDB entry 7N6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 762
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 7N6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 12Right-handed alpha
Helix 2
AA2
A
13 32Right-handed alpha
Helix 3
AA3
A
33 38Right-handed 310
Helix 4
AA4
A
48 62Right-handed alpha
Helix 5
AA5
A
83 101Right-handed alpha
Helix 6
AA6
A
119 124Right-handed alpha
Helix 7
AA7
A
143 159Right-handed alpha
Helix 8
AA8
A
160 164Right-handed 310
Helix 9
AA9
A
171 192Right-handed alpha
Helix 10
AB1
A
192 206Right-handed alpha
Helix 11
AB2
A
207 233Right-handed alpha
Helix 12
AB3
A
241 249Right-handed alpha
Helix 13
AB4
A
249 272Right-handed alpha
Helix 14
AB5
A
274 302Right-handed alpha
Helix 15
AB6
A
303 307Right-handed 310
Helix 16
AB7
A
309 342Right-handed alpha
Helix 17
AB8
A
343 347Right-handed 310
Helix 18
AB9
A
350 356Right-handed alpha
Helix 19
AC1
A
365 377Right-handed alpha
Helix 20
AC2
A
381 386Right-handed alpha
Helix 21
AC3
A
388 400Right-handed alpha
Helix 22
AC4
A
405 415Right-handed alpha
Helix 23
AC5
A
416 422Right-handed 310
Helix 24
AC6
A
428 432Right-handed 310
Helix 25
AC7
A
436 449Right-handed alpha
Helix 26
AC8
A
470 483Right-handed alpha
Helix 27
AC9
A
493 497Right-handed 310
Helix 28
AD1
A
522 524Right-handed 310
Helix 29
AD2
A
525 534Right-handed alpha
Helix 30
AD3
A
548 563Right-handed alpha
Helix 31
AD4
A
563 584Right-handed alpha
Helix 32
AD5
A
586 612Right-handed alpha
Helix 33
AD6
A
630 661Right-handed alpha
Helix 34
AD7
A
663 692Right-handed alpha
Helix 35
AD8
A
698 718Right-handed alpha
Helix 36
AD9
A
723 732Right-handed alpha
Helix 37
AE1
A
733 737Right-handed 310
Helix 38
AE2
A
739 748Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 7N6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 110first strand
Strand 2
A
133 136anti-parallel
Strand 3
A
69 73anti-parallel
Strand 4
A
166 170anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 425first strand
Strand 2
A
627 628parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 500first strand
Strand 2
A
513 518anti-parallel
Strand 3
A
457 462anti-parallel
Strand 4
A
543 547anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il