Analysis of interatomic Contacts of Structural Units in PDB entry:
7N6F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N6F entry

There is 1 chain in PDB entry 7N6F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 27ARG 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 7N6F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 72Right-handed alpha
Helix 2
AA2
A
89 98Right-handed alpha
Helix 3
AA3
A
105 108Right-handed 310
Helix 4
AA4
A
109 113Right-handed alpha
Helix 5
AA5
A
130 142Right-handed alpha
Helix 6
AA6
A
143 145Right-handed 310
Helix 7
AA7
A
146 152Right-handed alpha
Helix 8
AA8
A
153 170Right-handed alpha
Helix 9
AA9
A
180 198Right-handed alpha
Helix 10
AB1
A
202 206Right-handed 310
Helix 11
AB2
A
208 227Right-handed alpha
Helix 12
AB3
A
237 267Right-handed alpha
Helix 13
AB4
A
274 283Right-handed alpha
Helix 14
AB5
A
289 319Right-handed alpha
Helix 15
AB6
A
321 336Right-handed alpha
Helix 16
AB7
A
343 350Right-handed alpha
Helix 17
AB8
A
350 364Right-handed alpha
Helix 18
AB9
A
395 400Right-handed alpha
Helix 19
AC1
A
412 417Right-handed 310
Helix 20
AC2
A
439 457Right-handed alpha
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There are 5 sheets in PDB entry 7N6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 79first strand
Strand 2
A
82 87anti-parallel
Strand 3
A
389 394parallel
Strand 4
A
369 374anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
A
118 119anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 179first strand
Strand 2
A
483 488anti-parallel
Strand 3
A
458 462anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 380first strand
Strand 2
A
383 385anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
470 472first strand
Strand 2
A
476 478anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il