Analysis of interatomic Contacts of Structural Units in PDB entry:
7N6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N6O entry

There are 2 chains in PDB entry 7N6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 29SER 461
B
 SER 30SER 461
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7N6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 60Right-handed alpha
Helix 2
AA2
A
62 75Right-handed alpha
Helix 3
AA3
A
116 120Right-handed 310
Helix 4
AA4
A
122 134Right-handed alpha
Helix 5
AA5
A
146 150Right-handed 310
Helix 6
AA6
A
161 163Right-handed 310
Helix 7
AA7
A
164 182Right-handed alpha
Helix 8
AA8
A
208 219Right-handed alpha
Helix 9
AA9
A
219 227Right-handed alpha
Helix 10
AB1
A
243 251Right-handed alpha
Helix 11
AB2
A
254 259Right-handed 310
Helix 12
AB3
A
274 280Right-handed alpha
Helix 13
AB4
A
298 315Right-handed alpha
Helix 14
AB5
A
350 361Right-handed alpha
Helix 15
AB6
B
53 60Right-handed alpha
Helix 16
AB7
B
62 75Right-handed alpha
Helix 17
AB8
B
116 120Right-handed 310
Helix 18
AB9
B
122 134Right-handed alpha
Helix 19
AC1
B
146 150Right-handed 310
Helix 20
AC2
B
161 163Right-handed 310
Helix 21
AC3
B
164 182Right-handed alpha
Helix 22
AC4
B
208 219Right-handed alpha
Helix 23
AC5
B
219 227Right-handed alpha
Helix 24
AC6
B
243 251Right-handed alpha
Helix 25
AC7
B
254 259Right-handed 310
Helix 26
AC8
B
274 280Right-handed alpha
Helix 27
AC9
B
298 315Right-handed alpha
Helix 28
AD1
B
350 361Right-handed alpha
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There are 6 sheets in PDB entry 7N6O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
418 424anti-parallel
Strand 3
A
436 437anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
418 424anti-parallel
Strand 3
A
451 458anti-parallel
Strand 4
A
392 399anti-parallel
Strand 5
A
380 386anti-parallel
Strand 6
A
368 372anti-parallel
Strand 7
A
30 42anti-parallel
Strand 8
A
405 412parallel
Strand 9
A
442 447anti-parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 349first strand
Strand 2
A
336 341anti-parallel
Strand 3
A
320 328parallel
Strand 4
A
283 288parallel
Strand 5
A
261 265parallel
Strand 6
A
232 238parallel
Strand 7
A
189 191parallel
Strand 8
A
137 141parallel
Strand 9
A
84 88parallel
Strand 10
A
45 49parallel
Strand 11
A
320 328parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
431 432first strand
Strand 2
B
418 424anti-parallel
Strand 3
B
436 437anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
431 432first strand
Strand 2
B
418 424anti-parallel
Strand 3
B
451 458anti-parallel
Strand 4
B
392 399anti-parallel
Strand 5
B
380 386anti-parallel
Strand 6
B
368 372anti-parallel
Strand 7
B
31 42anti-parallel
Strand 8
B
405 412parallel
Strand 9
B
442 447anti-parallel
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There are 11 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
346 349first strand
Strand 2
B
336 341anti-parallel
Strand 3
B
320 328parallel
Strand 4
B
283 288parallel
Strand 5
B
261 265parallel
Strand 6
B
232 238parallel
Strand 7
B
189 191parallel
Strand 8
B
137 141parallel
Strand 9
B
84 88parallel
Strand 10
B
45 49parallel
Strand 11
B
320 328parallel
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