Analysis of interatomic Contacts of Structural Units in PDB entry:
7N6S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7N6S entry

There are 6 chains in PDB entry 7N6S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 0	THR 134
B	MET 1	THR 146
C	THR 2	LEU 148
D	THR 2	ARG 140
E	THR 2	LEU 148
F	ILE 3	LEU 148

There are 6 helices in PDB entry 7N6S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	68	76	Right-handed alpha
Helix 2	AA2	B	68	76	Right-handed alpha
Helix 3	AA3	C	68	76	Right-handed alpha
Helix 4	AA4	D	68	76	Right-handed alpha
Helix 5	AA5	E	68	76	Right-handed alpha
Helix 6	AA6	F	68	76	Right-handed alpha

There are 23 sheets in PDB entry 7N6S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	56	first strand
Strand 2	A	3	10	anti-parallel
Strand 3	D	124	129	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	32	first strand
Strand 2	A	113	121	anti-parallel
Strand 3	A	61	66	anti-parallel
Strand 4	A	84	86	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	41	first strand
Strand 2	A	106	108	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	50	first strand
Strand 2	A	95	100	anti-parallel
Strand 3	A	77	79	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	124	129	first strand
Strand 2	B	3	10	parallel
Strand 3	B	46	56	anti-parallel
Strand 4	B	93	100	anti-parallel
Strand 5	B	77	79	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	32	first strand
Strand 2	B	113	121	anti-parallel
Strand 3	B	61	66	anti-parallel
Strand 4	B	84	86	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	41	first strand
Strand 2	B	106	108	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	124	129	first strand
Strand 2	D	3	10	parallel
Strand 3	D	53	56	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	56	first strand
Strand 2	C	4	10	anti-parallel
Strand 3	E	125	129	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	32	first strand
Strand 2	C	113	121	anti-parallel
Strand 3	C	61	66	anti-parallel
Strand 4	C	84	86	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	41	first strand
Strand 2	C	106	108	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	50	first strand
Strand 2	C	95	100	anti-parallel
Strand 3	C	77	79	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	129	first strand
Strand 2	F	4	10	parallel
Strand 3	F	53	56	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	32	first strand
Strand 2	D	113	121	anti-parallel
Strand 3	D	61	66	anti-parallel
Strand 4	D	84	86	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	39	41	first strand
Strand 2	D	106	108	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	50	first strand
Strand 2	D	95	100	anti-parallel
Strand 3	D	77	79	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	56	first strand
Strand 2	E	3	10	anti-parallel
Strand 3	F	124	129	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	32	first strand
Strand 2	E	113	121	anti-parallel
Strand 3	E	61	66	anti-parallel
Strand 4	E	84	86	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	39	41	first strand
Strand 2	E	106	108	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	50	first strand
Strand 2	E	95	100	anti-parallel
Strand 3	E	77	79	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	28	32	first strand
Strand 2	F	113	121	anti-parallel
Strand 3	F	61	66	anti-parallel
Strand 4	F	84	86	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	39	41	first strand
Strand 2	F	106	108	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	46	50	first strand
Strand 2	F	95	100	anti-parallel
Strand 3	F	77	79	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7N6S

Analysis of interatomic Contacts of Structural Units in PDB entry:
7N6S