Analysis of interatomic Contacts of Structural Units in PDB entry:
7N6W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7N6W entry

There are 3 chains in PDB entry 7N6W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 32	LEU 663
B	THR 31	LEU 663
C	THR 31	LEU 661

There are 41 helices in PDB entry 7N6W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	57	61	Right-handed 310
Helix 2	AA2	A	99	117	Right-handed alpha
Helix 3	AA3	A	334	353	Right-handed alpha
Helix 4	AA4	A	368	373	Right-handed alpha
Helix 5	AA5	A	387	391	Right-handed 310
Helix 6	AA6	A	474	481	Right-handed alpha
Helix 7	AA7	A	482	486	Right-handed 310
Helix 8	AA8	A	531	546	Right-handed alpha
Helix 9	AA9	A	556	563	Right-handed alpha
Helix 10	AB1	A	569	598	Right-handed alpha
Helix 11	AB2	A	620	625	Right-handed alpha
Helix 12	AB3	A	628	663	Right-handed alpha
Helix 13	AB4	B	56	62	Right-handed alpha
Helix 14	AB5	B	66	72	Right-handed alpha
Helix 15	AB6	B	99	117	Right-handed alpha
Helix 16	AB7	B	122	127	Right-handed 310
Helix 17	AB8	B	278	282	Right-handed 310
Helix 18	AB9	B	335	353	Right-handed alpha
Helix 19	AC1	B	368	373	Right-handed alpha
Helix 20	AC2	B	377	381	Right-handed 310
Helix 21	AC3	B	474	481	Right-handed alpha
Helix 22	AC4	B	523	528	Right-handed alpha
Helix 23	AC5	B	531	535	Right-handed 310
Helix 24	AC6	B	538	543	Right-handed alpha
Helix 25	AC7	B	569	596	Right-handed alpha
Helix 26	AC8	B	618	623	Right-handed alpha
Helix 27	AC9	B	627	635	Right-handed alpha
Helix 28	AD1	B	638	661	Right-handed alpha
Helix 29	AD2	C	64	69	Right-handed alpha
Helix 30	AD3	C	99	117	Right-handed alpha
Helix 31	AD4	C	334	353	Right-handed alpha
Helix 32	AD5	C	368	373	Right-handed alpha
Helix 33	AD6	C	387	390	Right-handed 310
Helix 34	AD7	C	475	484	Right-handed alpha
Helix 35	AD8	C	532	542	Right-handed alpha
Helix 36	AD9	C	557	565	Right-handed alpha
Helix 37	AE1	C	566	569	Right-handed 310
Helix 38	AE2	C	571	596	Right-handed alpha
Helix 39	AE3	C	618	624	Right-handed alpha
Helix 40	AE4	C	627	635	Right-handed alpha
Helix 41	AE5	C	640	661	Right-handed alpha

There are 32 sheets in PDB entry 7N6W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	47	first strand
Strand 2	A	487	491	anti-parallel
Strand 3	A	224	228	anti-parallel
Strand 4	A	242	245	anti-parallel
Strand 5	A	83	86	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	215	218	anti-parallel
Strand 3	A	250	251	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	130	133	first strand
Strand 2	A	155	158	anti-parallel
Strand 3	A	174	176	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	161	first strand
Strand 2	A	170	171	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	183	first strand
Strand 2	A	191	193	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	200	203	first strand
Strand 2	A	432	435	parallel
Strand 3	A	423	425	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	272	274	first strand
Strand 2	A	284	286	anti-parallel
Strand 3	A	452	456	anti-parallel
Strand 4	A	467	470	anti-parallel
Strand 5	A	360	361	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	292	297	first strand
Strand 2	A	444	449	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	307	first strand
Strand 2	A	317	323	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	377	first strand
Strand 2	A	382	385	anti-parallel
Strand 3	A	418	419	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	494	497	first strand
Strand 2	B	35	40	anti-parallel
Strand 3	B	603	609	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	47	first strand
Strand 2	B	486	490	anti-parallel
Strand 3	B	223	227	anti-parallel
Strand 4	B	242	245	anti-parallel
Strand 5	B	83	86	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	55	first strand
Strand 2	B	216	218	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	93	first strand
Strand 2	B	237	239	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	134	first strand
Strand 2	B	154	157	anti-parallel
Strand 3	B	174	176	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	273	first strand
Strand 2	B	284	296	anti-parallel
Strand 3	B	331	334	anti-parallel
Strand 4	B	413	415	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	273	first strand
Strand 2	B	284	296	anti-parallel
Strand 3	B	445	454	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	301	302	first strand
Strand 2	B	322	323	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	360	first strand
Strand 2	B	465	467	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	376	first strand
Strand 2	B	383	385	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	423	425	first strand
Strand 2	B	433	435	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	496	498	first strand
Strand 2	C	34	38	anti-parallel
Strand 3	C	605	610	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	46	first strand
Strand 2	C	486	491	anti-parallel
Strand 3	C	223	228	anti-parallel
Strand 4	C	242	245	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	155	156	first strand
Strand 2	C	175	176	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	162	first strand
Strand 2	C	169	172	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	181	184	first strand
Strand 2	C	188	193	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	215	216	first strand
Strand 2	C	250	251	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	259	261	first strand
Strand 2	C	449	455	anti-parallel
Strand 3	C	283	292	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	376	first strand
Strand 2	C	383	385	anti-parallel
Strand 3	C	414	420	anti-parallel
Strand 4	C	330	333	anti-parallel
Strand 5	C	295	297	anti-parallel
Strand 6	C	444	445	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	300	312	first strand
Strand 2	C	315	326	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	361	first strand
Strand 2	C	465	468	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	424	425	first strand
Strand 2	C	433	434	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7N6W

Analysis of interatomic Contacts of Structural Units in PDB entry:
7N6W