Analysis of interatomic Contacts of Structural Units in PDB entry:
7N7H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N7H entry

There is 1 chain in PDB entry 7N7H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0MET 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7N7H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 46Right-handed alpha
Helix 2
AA2
A
57 63Right-handed 310
Helix 3
AA3
A
64 77Right-handed alpha
Helix 4
AA4
A
93 101Right-handed alpha
Helix 5
AA5
A
102 104Right-handed 310
Helix 6
AA6
A
115 123Right-handed alpha
Helix 7
AA7
A
133 146Right-handed alpha
Helix 8
AA8
A
164 172Right-handed alpha
Helix 9
AA9
A
197 201Right-handed 310
Helix 10
AB1
A
203 214Right-handed alpha
Helix 11
AB2
A
224 229Right-handed alpha
Helix 12
AB3
A
255 259Right-handed alpha
Helix 13
AB4
A
259 265Right-handed alpha
Helix 14
AB5
A
270 277Right-handed alpha
Helix 15
AB6
A
284 288Right-handed 310
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There are 2 sheets in PDB entry 7N7H. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 223first strand
Strand 2
A
175 180parallel
Strand 3
A
148 155parallel
Strand 4
A
106 110parallel
Strand 5
A
82 87parallel
Strand 6
A
50 54parallel
Strand 7
A
5 9parallel
Strand 8
A
233 235parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 243first strand
Strand 2
A
250 254anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il