Analysis of interatomic Contacts of Structural Units in PDB entry:
7N7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N7V entry

There are 2 chains in PDB entry 7N7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -3ALA 339
B
 GLN 4ALA 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7N7V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 29Right-handed alpha
Helix 2
AA2
A
31 35Right-handed 310
Helix 3
AA3
A
36 40Right-handed 310
Helix 4
AA4
A
44 56Right-handed alpha
Helix 5
AA5
A
74 87Right-handed alpha
Helix 6
AA6
A
152 163Right-handed alpha
Helix 7
AA7
A
166 172Right-handed alpha
Helix 8
AA8
A
207 214Right-handed alpha
Helix 9
AA9
A
215 217Right-handed 310
Helix 10
AB1
A
224 239Right-handed alpha
Helix 11
AB2
A
297 302Right-handed alpha
Helix 12
AB3
A
313 317Right-handed 310
Helix 13
AB4
A
319 334Right-handed alpha
Helix 14
AB5
B
11 28Right-handed alpha
Helix 15
AB6
B
31 35Right-handed 310
Helix 16
AB7
B
36 40Right-handed 310
Helix 17
AB8
B
44 56Right-handed alpha
Helix 18
AB9
B
74 87Right-handed alpha
Helix 19
AC1
B
152 163Right-handed alpha
Helix 20
AC2
B
166 172Right-handed alpha
Helix 21
AC3
B
207 214Right-handed alpha
Helix 22
AC4
B
215 217Right-handed 310
Helix 23
AC5
B
224 239Right-handed alpha
Helix 24
AC6
B
297 302Right-handed alpha
Helix 25
AC7
B
313 317Right-handed 310
Helix 26
AC8
B
319 334Right-handed alpha
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There are 10 sheets in PDB entry 7N7V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
62 66parallel
Strand 3
A
254 258anti-parallel
Strand 4
A
132 139anti-parallel
Strand 5
A
279 286anti-parallel
Strand 6
A
91 92anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
62 66parallel
Strand 3
A
254 258anti-parallel
Strand 4
A
132 139anti-parallel
Strand 5
A
279 286anti-parallel
Strand 6
A
103 105anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 247first strand
Strand 2
A
147 151anti-parallel
Strand 3
A
262 266anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 177first strand
Strand 2
A
189 192anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 198first strand
Strand 2
A
201 204anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 9first strand
Strand 2
B
62 66parallel
Strand 3
B
254 258anti-parallel
Strand 4
B
132 139anti-parallel
Strand 5
B
279 286anti-parallel
Strand 6
B
91 92anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 9first strand
Strand 2
B
62 66parallel
Strand 3
B
254 258anti-parallel
Strand 4
B
132 139anti-parallel
Strand 5
B
279 286anti-parallel
Strand 6
B
103 105anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
245 247first strand
Strand 2
B
147 151anti-parallel
Strand 3
B
262 266anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 177first strand
Strand 2
B
189 192anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 198first strand
Strand 2
B
201 204anti-parallel
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