Analysis of interatomic Contacts of Structural Units in PDB entry:
7N80


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N80 entry

There are 2 chains in PDB entry 7N80 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 32THR 416
B
 LYS 32LEU 415
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7N80. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 58Right-handed alpha
Helix 2
AA2
A
67 72Right-handed 310
Helix 3
AA3
A
99 110Right-handed alpha
Helix 4
AA4
A
113 123Right-handed alpha
Helix 5
AA5
A
153 174Right-handed alpha
Helix 6
AA6
A
253 274Right-handed alpha
Helix 7
AA7
A
288 294Right-handed alpha
Helix 8
AA8
A
399 415Right-handed alpha
Helix 9
AA9
B
40 59Right-handed alpha
Helix 10
AB1
B
67 72Right-handed 310
Helix 11
AB2
B
99 110Right-handed alpha
Helix 12
AB3
B
113 123Right-handed alpha
Helix 13
AB4
B
153 174Right-handed alpha
Helix 14
AB5
B
253 274Right-handed alpha
Helix 15
AB6
B
288 295Right-handed alpha
Helix 16
AB7
B
399 413Right-handed alpha
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There are 3 sheets in PDB entry 7N80. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 14 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 128first strand
Strand 2
A
138 141anti-parallel
Strand 3
A
147 152anti-parallel
Strand 4
A
194 202anti-parallel
Strand 5
A
183 191anti-parallel
Strand 6
A
92 98anti-parallel
Strand 7
A
74 80anti-parallel
Strand 8
B
74 82anti-parallel
Strand 9
B
92 98anti-parallel
Strand 10
B
183 191anti-parallel
Strand 11
B
194 202anti-parallel
Strand 12
B
147 152anti-parallel
Strand 13
B
140 141anti-parallel
Strand 14
B
127 128anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 217first strand
Strand 2
A
280 287anti-parallel
Strand 3
A
361 368anti-parallel
Strand 4
A
350 352anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
213 217first strand
Strand 2
B
280 287anti-parallel
Strand 3
B
361 368anti-parallel
Strand 4
B
350 352anti-parallel
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