Analysis of interatomic Contacts of Structural Units in PDB entry:
7N8N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N8N entry

There are 6 chains in PDB entry 7N8N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 24GLY 220
B
 ARG 30ARG 231
C
 ASP 24GLY 220
D
 ARG 30ARG 231
I
 T -64 T 60
J
 A -60 A 64
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7N8N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 46Right-handed alpha
Helix 2
AA2
A
54 80Right-handed alpha
Helix 3
AA3
A
86 97Right-handed alpha
Helix 4
AA4
A
117 121Right-handed 310
Helix 5
AA5
A
136 143Right-handed alpha
Helix 6
AA6
A
150 165Right-handed alpha
Helix 7
AA7
A
172 201Right-handed alpha
Helix 8
AA8
A
207 219Right-handed alpha
Helix 9
AA9
B
38 44Right-handed alpha
Helix 10
AB1
B
45 50Right-handed alpha
Helix 11
AB2
B
56 81Right-handed alpha
Helix 12
AB3
B
90 102Right-handed alpha
Helix 13
AB4
B
103 127Right-handed alpha
Helix 14
AB5
B
129 133Right-handed 310
Helix 15
AB6
B
140 151Right-handed alpha
Helix 16
AB7
B
159 188Right-handed alpha
Helix 17
AB8
B
194 205Right-handed alpha
Helix 18
AB9
B
205 213Right-handed alpha
Helix 19
AC1
C
34 46Right-handed alpha
Helix 20
AC2
C
54 80Right-handed alpha
Helix 21
AC3
C
86 97Right-handed alpha
Helix 22
AC4
C
117 121Right-handed 310
Helix 23
AC5
C
136 143Right-handed alpha
Helix 24
AC6
C
150 165Right-handed alpha
Helix 25
AC7
C
172 201Right-handed alpha
Helix 26
AC8
C
207 219Right-handed alpha
Helix 27
AC9
D
38 44Right-handed alpha
Helix 28
AD1
D
45 50Right-handed alpha
Helix 29
AD2
D
56 81Right-handed alpha
Helix 30
AD3
D
90 102Right-handed alpha
Helix 31
AD4
D
103 127Right-handed alpha
Helix 32
AD5
D
129 133Right-handed 310
Helix 33
AD6
D
140 151Right-handed alpha
Helix 34
AD7
D
159 188Right-handed alpha
Helix 35
AD8
D
194 205Right-handed alpha
Helix 36
AD9
D
205 213Right-handed alpha
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There are 2 sheets in PDB entry 7N8N. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
170 171parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
84 85first strand
Strand 2
C
170 171parallel
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