Analysis of interatomic Contacts of Structural Units in PDB entry:
7N8X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N8X entry

There are 2 chains in PDB entry 7N8X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 2ASN 141
A
 LYS 374ILE 1876
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7N8X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
13 17Right-handed 310
Helix 2
AA2
B
48 53Right-handed 310
Helix 3
AA3
B
87 92Right-handed alpha
Helix 4
AA4
B
123 127Right-handed 310
Helix 5
AA5
A
398 415Right-handed alpha
Helix 6
AA6
A
416 420Right-handed 310
Helix 7
AA7
A
426 438Right-handed alpha
Helix 8
AA8
A
443 450Right-handed alpha
Helix 9
AA9
A
451 456Right-handed 310
Helix 10
AB1
A
463 470Right-handed alpha
Helix 11
AB2
A
472 484Right-handed alpha
Helix 12
AB3
A
507 510Right-handed 310
Helix 13
AB4
A
511 516Right-handed alpha
Helix 14
AB5
A
523 539Right-handed alpha
Helix 15
AB6
A
560 569Right-handed alpha
Helix 16
AB7
A
588 601Right-handed alpha
Helix 17
AB8
A
667 682Right-handed alpha
Helix 18
AB9
A
710 727Right-handed alpha
Helix 19
AC1
A
764 775Right-handed alpha
Helix 20
AC2
A
793 809Right-handed alpha
Helix 21
AC3
A
814 836Right-handed alpha
Helix 22
AC4
A
1773 1778Right-handed alpha
Helix 23
AC5
A
1792 1796Right-handed alpha
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There are 8 sheets in PDB entry 7N8X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
131 138parallel
Strand 3
B
106 111anti-parallel
Strand 4
B
59 65anti-parallel
Strand 5
B
84 86anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
131 138parallel
Strand 3
B
106 111anti-parallel
Strand 4
B
59 65anti-parallel
Strand 5
B
114 115anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 37first strand
Strand 2
B
96 97anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
628 629first strand
Strand 2
A
619 621anti-parallel
Strand 3
A
605 608anti-parallel
Strand 4
A
578 583parallel
Strand 5
A
645 651parallel
Strand 6
A
690 696parallel
Strand 7
A
736 737parallel
Strand 8
A
778 781anti-parallel
Strand 9
A
786 787anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
744 746first strand
Strand 2
A
752 755anti-parallel
Strand 3
A
761 762anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1654 1657first strand
Strand 2
A
1690 1693parallel
Strand 3
A
1716 1719parallel
Strand 4
A
1765 1767parallel
Strand 5
A
1749 1752anti-parallel
Strand 6
A
1741 1743anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1701 1704first strand
Strand 2
A
1730 1733parallel
Strand 3
A
1781 1784parallel
Strand 4
A
1790 1791anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1844 1845first strand
Strand 2
A
1852 1853anti-parallel
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