Analysis of interatomic Contacts of Structural Units in PDB entry:
7N9G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7N9G entry

There are 3 chains in PDB entry 7N9G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 252GLN 517
B
 ASP 252GLN 517
C
 LYS 253GLU 518
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 7N9G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
257 259Right-handed 310
Helix 2
AA2
A
268 271Right-handed 310
Helix 3
AA3
A
282 284Right-handed 310
Helix 4
AA4
A
298 311Right-handed alpha
Helix 5
AA5
A
342 349Right-handed alpha
Helix 6
AA6
A
355 376Right-handed alpha
Helix 7
AA7
A
384 386Right-handed 310
Helix 8
AA8
A
392 394Right-handed 310
Helix 9
AA9
A
421 425Right-handed 310
Helix 10
AB1
A
426 433Right-handed alpha
Helix 11
AB2
A
436 453Right-handed alpha
Helix 12
AB3
A
463 465Right-handed 310
Helix 13
AB4
A
466 473Right-handed alpha
Helix 14
AB5
A
484 495Right-handed alpha
Helix 15
AB6
A
498 502Right-handed 310
Helix 16
AB7
A
504 516Right-handed alpha
Helix 17
AB8
B
257 259Right-handed 310
Helix 18
AB9
B
282 284Right-handed 310
Helix 19
AC1
B
298 310Right-handed alpha
Helix 20
AC2
B
342 349Right-handed alpha
Helix 21
AC3
B
355 376Right-handed alpha
Helix 22
AC4
B
384 386Right-handed 310
Helix 23
AC5
B
392 394Right-handed 310
Helix 24
AC6
B
421 425Right-handed 310
Helix 25
AC7
B
426 433Right-handed alpha
Helix 26
AC8
B
436 453Right-handed alpha
Helix 27
AC9
B
463 465Right-handed 310
Helix 28
AD1
B
466 473Right-handed alpha
Helix 29
AD2
B
484 495Right-handed alpha
Helix 30
AD3
B
498 502Right-handed 310
Helix 31
AD4
B
504 516Right-handed alpha
Helix 32
AD5
C
299 311Right-handed alpha
Helix 33
AD6
C
342 349Right-handed alpha
Helix 34
AD7
C
355 376Right-handed alpha
Helix 35
AD8
C
384 386Right-handed 310
Helix 36
AD9
C
392 394Right-handed 310
Helix 37
AE1
C
426 433Right-handed alpha
Helix 38
AE2
C
436 453Right-handed alpha
Helix 39
AE3
C
463 465Right-handed 310
Helix 40
AE4
C
466 473Right-handed alpha
Helix 41
AE5
C
484 495Right-handed alpha
Helix 42
AE6
C
498 502Right-handed 310
Helix 43
AE7
C
504 518Right-handed alpha
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There are 11 sheets in PDB entry 7N9G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 266first strand
Strand 2
A
275 280anti-parallel
Strand 3
A
285 292anti-parallel
Strand 4
A
330 335anti-parallel
Strand 5
A
320 324anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
340 341first strand
Strand 2
A
388 390anti-parallel
Strand 3
A
396 398anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 380first strand
Strand 2
A
403 405anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 268first strand
Strand 2
B
274 280anti-parallel
Strand 3
B
285 292anti-parallel
Strand 4
B
330 335anti-parallel
Strand 5
B
320 324anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
340 341first strand
Strand 2
B
388 390anti-parallel
Strand 3
B
396 398anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
378 379first strand
Strand 2
B
405 406anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
412 413first strand
Strand 2
B
434 435anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
276 278first strand
Strand 2
C
287 289anti-parallel
Strand 3
C
333 334anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
340 341first strand
Strand 2
C
388 390anti-parallel
Strand 3
C
396 398anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
378 380first strand
Strand 2
C
403 405anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
412 413first strand
Strand 2
C
434 435anti-parallel
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