Analysis of interatomic Contacts of Structural Units in PDB entry:
7NBZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NBZ entry

There are 3 chains in PDB entry 7NBZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2LEU 387
B
 MET 1LEU 387
C
 MET 1GLU 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 7NBZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 29Right-handed alpha
Helix 2
AA2
A
42 56Right-handed alpha
Helix 3
AA3
A
70 77Right-handed alpha
Helix 4
AA4
A
94 99Right-handed alpha
Helix 5
AA5
A
134 149Right-handed alpha
Helix 6
AA6
A
164 178Right-handed alpha
Helix 7
AA7
A
191 208Right-handed alpha
Helix 8
AA8
A
214 218Right-handed 310
Helix 9
AA9
A
219 229Right-handed alpha
Helix 10
AB1
A
240 247Right-handed alpha
Helix 11
AB2
A
286 298Right-handed alpha
Helix 12
AB3
A
299 311Right-handed alpha
Helix 13
AB4
A
316 321Right-handed 310
Helix 14
AB5
A
322 329Right-handed alpha
Helix 15
AB6
A
331 340Right-handed alpha
Helix 16
AB7
A
350 367Right-handed alpha
Helix 17
AB8
A
371 387Right-handed alpha
Helix 18
AB9
B
10 13Right-handed 310
Helix 19
AC1
B
14 29Right-handed alpha
Helix 20
AC2
B
42 57Right-handed alpha
Helix 21
AC3
B
70 77Right-handed alpha
Helix 22
AC4
B
94 99Right-handed alpha
Helix 23
AC5
B
121 127Right-handed alpha
Helix 24
AC6
B
134 150Right-handed alpha
Helix 25
AC7
B
164 178Right-handed alpha
Helix 26
AC8
B
191 208Right-handed alpha
Helix 27
AC9
B
214 218Right-handed 310
Helix 28
AD1
B
219 229Right-handed alpha
Helix 29
AD2
B
240 246Right-handed alpha
Helix 30
AD3
B
286 298Right-handed alpha
Helix 31
AD4
B
299 311Right-handed alpha
Helix 32
AD5
B
316 321Right-handed 310
Helix 33
AD6
B
322 329Right-handed alpha
Helix 34
AD7
B
331 340Right-handed alpha
Helix 35
AD8
B
350 367Right-handed alpha
Helix 36
AD9
B
371 387Right-handed alpha
Helix 37
AE1
C
10 13Right-handed 310
Helix 38
AE2
C
14 29Right-handed alpha
Helix 39
AE3
C
42 56Right-handed alpha
Helix 40
AE4
C
70 77Right-handed alpha
Helix 41
AE5
C
93 99Right-handed alpha
Helix 42
AE6
C
121 127Right-handed alpha
Helix 43
AE7
C
134 150Right-handed alpha
Helix 44
AE8
C
164 178Right-handed alpha
Helix 45
AE9
C
191 208Right-handed alpha
Helix 46
AF1
C
214 218Right-handed 310
Helix 47
AF2
C
219 229Right-handed alpha
Helix 48
AF3
C
240 246Right-handed alpha
Helix 49
AF4
C
286 298Right-handed alpha
Helix 50
AF5
C
299 311Right-handed alpha
Helix 51
AF6
C
316 321Right-handed 310
Helix 52
AF7
C
322 329Right-handed alpha
Helix 53
AF8
C
331 340Right-handed alpha
Helix 54
AF9
C
350 367Right-handed alpha
Helix 55
AG1
C
371 385Right-handed alpha
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There are 13 sheets in PDB entry 7NBZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
3 8parallel
Strand 3
A
63 67parallel
Strand 4
A
276 280anti-parallel
Strand 5
A
108 111anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
104 105anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 158first strand
Strand 2
A
232 237parallel
Strand 3
A
116 120anti-parallel
Strand 4
A
256 259anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 272first strand
Strand 2
A
342 343parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 37first strand
Strand 2
B
3 8parallel
Strand 3
B
63 67parallel
Strand 4
B
271 280anti-parallel
Strand 5
B
108 114anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 37first strand
Strand 2
B
3 8parallel
Strand 3
B
63 67parallel
Strand 4
B
271 280anti-parallel
Strand 5
B
342 343parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 101first strand
Strand 2
B
104 105anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 158first strand
Strand 2
B
232 237parallel
Strand 3
B
116 120anti-parallel
Strand 4
B
256 259anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 37first strand
Strand 2
C
3 8parallel
Strand 3
C
63 67parallel
Strand 4
C
271 281anti-parallel
Strand 5
C
108 114anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 81first strand
Strand 2
C
271 281anti-parallel
Strand 3
C
342 343parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 101first strand
Strand 2
C
104 105anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 158first strand
Strand 2
C
232 237parallel
Strand 3
C
116 120anti-parallel
Strand 4
C
256 259anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
183 184first strand
Strand 2
C
187 188anti-parallel
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