Analysis of interatomic Contacts of Structural Units in PDB entry:
7NFU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NFU entry

There are 2 chains in PDB entry 7NFU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 5GLY 225
B
 PHE 5GLY 225
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7NFU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 10Right-handed 310
Helix 2
AA2
A
12 21Right-handed alpha
Helix 3
AA3
A
48 63Right-handed alpha
Helix 4
AA4
A
83 93Right-handed alpha
Helix 5
AA5
A
106 121Right-handed alpha
Helix 6
AA6
A
125 141Right-handed alpha
Helix 7
AA7
A
143 151Right-handed alpha
Helix 8
AA8
A
154 164Right-handed alpha
Helix 9
AA9
A
168 177Right-handed alpha
Helix 10
AB1
A
181 190Right-handed alpha
Helix 11
AB2
A
193 207Right-handed alpha
Helix 12
AB3
A
210 224Right-handed alpha
Helix 13
AB4
B
5 10Right-handed 310
Helix 14
AB5
B
48 63Right-handed alpha
Helix 15
AB6
B
83 93Right-handed alpha
Helix 16
AB7
B
106 122Right-handed alpha
Helix 17
AB8
B
125 141Right-handed alpha
Helix 18
AB9
B
143 151Right-handed alpha
Helix 19
AC1
B
154 164Right-handed alpha
Helix 20
AC2
B
168 177Right-handed alpha
Helix 21
AC3
B
181 190Right-handed alpha
Helix 22
AC4
B
193 207Right-handed alpha
Helix 23
AC5
B
210 224Right-handed alpha
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There are 2 sheets in PDB entry 7NFU. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
97 102anti-parallel
Strand 3
A
68 73parallel
Strand 4
A
77 82anti-parallel
Strand 5
A
36 37parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 32first strand
Strand 2
B
97 102anti-parallel
Strand 3
B
68 73parallel
Strand 4
B
77 82anti-parallel
Strand 5
B
36 37parallel
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