Analysis of interatomic Contacts of Structural Units in PDB entry:
7NG7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NG7 entry

There is 1 chain in PDB entry 7NG7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 260LEU 536
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7NG7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
266 268Right-handed 310
Helix 2
AA2
A
306 319Right-handed alpha
Helix 3
AA3
A
348 355Right-handed alpha
Helix 4
AA4
A
357 361Right-handed 310
Helix 5
AA5
A
362 383Right-handed alpha
Helix 6
AA6
A
391 393Right-handed 310
Helix 7
AA7
A
399 401Right-handed 310
Helix 8
AA8
A
409 413Right-handed 310
Helix 9
AA9
A
419 423Right-handed 310
Helix 10
AB1
A
428 432Right-handed 310
Helix 11
AB2
A
433 440Right-handed alpha
Helix 12
AB3
A
443 460Right-handed alpha
Helix 13
AB4
A
470 480Right-handed alpha
Helix 14
AB5
A
491 502Right-handed alpha
Helix 15
AB6
A
505 509Right-handed 310
Helix 16
AB7
A
511 521Right-handed alpha
Helix 17
AB8
A
521 526Right-handed alpha
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There are 2 sheets in PDB entry 7NG7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
270 278first strand
Strand 2
A
283 289anti-parallel
Strand 3
A
293 299anti-parallel
Strand 4
A
338 341anti-parallel
Strand 5
A
328 332anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
395 397first strand
Strand 2
A
403 405anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il