Analysis of interatomic Contacts of Structural Units in PDB entry:
7NI6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7NI6 entry

There are 2 chains in PDB entry 7NI6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 1516	VAL 3056
B	HIS 1516	VAL 3056

There are169 helices in PDB entry 7NI6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1516	1525	Right-handed alpha
Helix 2	AA2	A	1526	1530	Right-handed 310
Helix 3	AA3	A	1531	1547	Right-handed alpha
Helix 4	AA4	A	1555	1561	Right-handed alpha
Helix 5	AA5	A	1571	1583	Right-handed alpha
Helix 6	AA6	A	1589	1602	Right-handed alpha
Helix 7	AA7	A	1606	1609	Right-handed 310
Helix 8	AA8	A	1610	1624	Right-handed alpha
Helix 9	AA9	A	1625	1635	Right-handed alpha
Helix 10	AB1	A	1636	1637	Right-handed 310
Helix 11	AB2	A	1638	1641	Right-handed 310
Helix 12	AB3	A	1642	1658	Right-handed alpha
Helix 13	AB4	A	1663	1679	Right-handed alpha
Helix 14	AB5	A	1693	1703	Right-handed alpha
Helix 15	AB6	A	1705	1723	Right-handed alpha
Helix 16	AB7	A	1726	1743	Right-handed alpha
Helix 17	AB8	A	1743	1754	Right-handed alpha
Helix 18	AB9	A	1758	1764	Right-handed alpha
Helix 19	AC1	A	1787	1790	Right-handed 310
Helix 20	AC2	A	1791	1796	Right-handed alpha
Helix 21	AC3	A	1801	1816	Right-handed alpha
Helix 22	AC4	A	1821	1826	Right-handed alpha
Helix 23	AC5	A	1827	1834	Right-handed alpha
Helix 24	AC6	A	1834	1852	Right-handed alpha
Helix 25	AC7	A	1856	1874	Right-handed alpha
Helix 26	AC8	A	1902	1918	Right-handed alpha
Helix 27	AC9	A	1926	1932	Right-handed alpha
Helix 28	AD1	A	1937	1948	Right-handed alpha
Helix 29	AD2	A	1950	1972	Right-handed alpha
Helix 30	AD3	A	1987	1996	Right-handed alpha
Helix 31	AD4	A	2000	2013	Right-handed alpha
Helix 32	AD5	A	2015	2019	Right-handed 310
Helix 33	AD6	A	2028	2039	Right-handed alpha
Helix 34	AD7	A	2041	2052	Right-handed alpha
Helix 35	AD8	A	2056	2071	Right-handed alpha
Helix 36	AD9	A	2073	2085	Right-handed alpha
Helix 37	AE1	A	2093	2107	Right-handed alpha
Helix 38	AE2	A	2123	2137	Right-handed alpha
Helix 39	AE3	A	2139	2161	Right-handed alpha
Helix 40	AE4	A	2165	2168	Right-handed 310
Helix 41	AE5	A	2169	2191	Right-handed alpha
Helix 42	AE6	A	2194	2212	Right-handed alpha
Helix 43	AE7	A	2216	2237	Right-handed alpha
Helix 44	AE8	A	2240	2265	Right-handed alpha
Helix 45	AE9	A	2268	2282	Right-handed alpha
Helix 46	AF1	A	2289	2302	Right-handed alpha
Helix 47	AF2	A	2304	2323	Right-handed alpha
Helix 48	AF3	A	2327	2349	Right-handed alpha
Helix 49	AF4	A	2352	2360	Right-handed alpha
Helix 50	AF5	A	2360	2368	Right-handed alpha
Helix 51	AF6	A	2377	2407	Right-handed alpha
Helix 52	AF7	A	2407	2419	Right-handed alpha
Helix 53	AF8	A	2443	2477	Right-handed alpha
Helix 54	AF9	A	2480	2482	Right-handed 310
Helix 55	AG1	A	2483	2494	Right-handed alpha
Helix 56	AG2	A	2497	2507	Right-handed alpha
Helix 57	AG3	A	2508	2511	Right-handed 310
Helix 58	AG4	A	2512	2518	Right-handed 310
Helix 59	AG5	A	2519	2526	Right-handed alpha
Helix 60	AG6	A	2536	2552	Right-handed alpha
Helix 61	AG7	A	2552	2565	Right-handed alpha
Helix 62	AG8	A	2567	2574	Right-handed alpha
Helix 63	AG9	A	2593	2613	Right-handed alpha
Helix 64	AH1	A	2613	2633	Right-handed alpha
Helix 65	AH2	A	2635	2639	Right-handed 310
Helix 66	AH3	A	2651	2656	Right-handed alpha
Helix 67	AH4	A	2722	2742	Right-handed alpha
Helix 68	AH5	A	2742	2748	Right-handed alpha
Helix 69	AH6	A	2776	2781	Right-handed alpha
Helix 70	AH7	A	2786	2791	Right-handed alpha
Helix 71	AH8	A	2797	2808	Right-handed alpha
Helix 72	AH9	A	2812	2826	Right-handed alpha
Helix 73	AI1	A	2832	2839	Right-handed alpha
Helix 74	AI2	A	2841	2866	Right-handed alpha
Helix 75	AI3	A	2872	2874	Right-handed 310
Helix 76	AI4	A	2895	2899	Right-handed 310
Helix 77	AI5	A	2911	2917	Right-handed alpha
Helix 78	AI6	A	2925	2941	Right-handed alpha
Helix 79	AI7	A	2941	2954	Right-handed alpha
Helix 80	AI8	A	2963	2971	Right-handed alpha
Helix 81	AI9	A	3001	3019	Right-handed alpha
Helix 82	AJ1	A	3027	3040	Right-handed alpha
Helix 83	AJ2	A	3041	3047	Right-handed alpha
Helix 84	AJ3	A	3049	3053	Right-handed 310
Helix 85	AJ4	B	1517	1525	Right-handed alpha
Helix 86	AJ5	B	1526	1530	Right-handed 310
Helix 87	AJ6	B	1531	1547	Right-handed alpha
Helix 88	AJ7	B	1552	1561	Right-handed alpha
Helix 89	AJ8	B	1571	1583	Right-handed alpha
Helix 90	AJ9	B	1589	1603	Right-handed alpha
Helix 91	AK1	B	1606	1609	Right-handed 310
Helix 92	AK2	B	1610	1624	Right-handed alpha
Helix 93	AK3	B	1625	1635	Right-handed alpha
Helix 94	AK4	B	1636	1637	Right-handed 310
Helix 95	AK5	B	1638	1641	Right-handed 310
Helix 96	AK6	B	1642	1658	Right-handed alpha
Helix 97	AK7	B	1663	1679	Right-handed alpha
Helix 98	AK8	B	1693	1703	Right-handed alpha
Helix 99	AK9	B	1705	1722	Right-handed alpha
Helix 100	AL1	B	1726	1742	Right-handed alpha
Helix 101	AL2	B	1743	1754	Right-handed alpha
Helix 102	AL3	B	1758	1765	Right-handed alpha
Helix 103	AL4	B	1791	1796	Right-handed alpha
Helix 104	AL5	B	1801	1816	Right-handed alpha
Helix 105	AL6	B	1821	1826	Right-handed alpha
Helix 106	AL7	B	1827	1834	Right-handed alpha
Helix 107	AL8	B	1834	1852	Right-handed alpha
Helix 108	AL9	B	1856	1873	Right-handed alpha
Helix 109	AM1	B	1902	1919	Right-handed alpha
Helix 110	AM2	B	1926	1932	Right-handed alpha
Helix 111	AM3	B	1937	1948	Right-handed alpha
Helix 112	AM4	B	1950	1972	Right-handed alpha
Helix 113	AM5	B	1987	1998	Right-handed alpha
Helix 114	AM6	B	2000	2013	Right-handed alpha
Helix 115	AM7	B	2015	2020	Right-handed 310
Helix 116	AM8	B	2023	2027	Right-handed 310
Helix 117	AM9	B	2028	2039	Right-handed alpha
Helix 118	AN1	B	2041	2052	Right-handed alpha
Helix 119	AN2	B	2056	2071	Right-handed alpha
Helix 120	AN3	B	2073	2086	Right-handed alpha
Helix 121	AN4	B	2093	2106	Right-handed alpha
Helix 122	AN5	B	2123	2137	Right-handed alpha
Helix 123	AN6	B	2139	2160	Right-handed alpha
Helix 124	AN7	B	2165	2168	Right-handed 310
Helix 125	AN8	B	2169	2191	Right-handed alpha
Helix 126	AN9	B	2194	2212	Right-handed alpha
Helix 127	AO1	B	2216	2237	Right-handed alpha
Helix 128	AO2	B	2240	2265	Right-handed alpha
Helix 129	AO3	B	2268	2282	Right-handed alpha
Helix 130	AO4	B	2289	2302	Right-handed alpha
Helix 131	AO5	B	2304	2322	Right-handed alpha
Helix 132	AO6	B	2327	2349	Right-handed alpha
Helix 133	AO7	B	2352	2360	Right-handed alpha
Helix 134	AO8	B	2360	2368	Right-handed alpha
Helix 135	AO9	B	2377	2407	Right-handed alpha
Helix 136	AP1	B	2407	2419	Right-handed alpha
Helix 137	AP2	B	2443	2477	Right-handed alpha
Helix 138	AP3	B	2480	2482	Right-handed 310
Helix 139	AP4	B	2483	2494	Right-handed alpha
Helix 140	AP5	B	2497	2507	Right-handed alpha
Helix 141	AP6	B	2508	2511	Right-handed 310
Helix 142	AP7	B	2512	2517	Right-handed 310
Helix 143	AP8	B	2519	2526	Right-handed alpha
Helix 144	AP9	B	2536	2552	Right-handed alpha
Helix 145	AQ1	B	2552	2565	Right-handed alpha
Helix 146	AQ2	B	2567	2573	Right-handed alpha
Helix 147	AQ3	B	2593	2613	Right-handed alpha
Helix 148	AQ4	B	2613	2633	Right-handed alpha
Helix 149	AQ5	B	2651	2656	Right-handed alpha
Helix 150	AQ6	B	2722	2742	Right-handed alpha
Helix 151	AQ7	B	2742	2749	Right-handed alpha
Helix 152	AQ8	B	2776	2781	Right-handed alpha
Helix 153	AQ9	B	2786	2791	Right-handed alpha
Helix 154	AR1	B	2797	2808	Right-handed alpha
Helix 155	AR2	B	2809	2811	Right-handed 310
Helix 156	AR3	B	2812	2826	Right-handed alpha
Helix 157	AR4	B	2830	2832	Right-handed 310
Helix 158	AR5	B	2833	2839	Right-handed alpha
Helix 159	AR6	B	2841	2866	Right-handed alpha
Helix 160	AR7	B	2872	2874	Right-handed 310
Helix 161	AR8	B	2895	2899	Right-handed 310
Helix 162	AR9	B	2911	2919	Right-handed alpha
Helix 163	AS1	B	2925	2941	Right-handed alpha
Helix 164	AS2	B	2941	2954	Right-handed alpha
Helix 165	AS3	B	2963	2971	Right-handed alpha
Helix 166	AS4	B	3001	3019	Right-handed alpha
Helix 167	AS5	B	3027	3040	Right-handed alpha
Helix 168	AS6	B	3041	3048	Right-handed alpha
Helix 169	AS7	B	3049	3053	Right-handed 310

There are 8 sheets in PDB entry 7NI6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2645	2646	first strand
Strand 2	A	2689	2692	anti-parallel
Strand 3	A	2700	2706	anti-parallel
Strand 4	A	2682	2686	anti-parallel
Strand 5	A	2659	2663	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2645	2646	first strand
Strand 2	A	2689	2692	anti-parallel
Strand 3	A	2700	2706	anti-parallel
Strand 4	A	2711	2718	anti-parallel
Strand 5	A	2764	2768	anti-parallel
Strand 6	A	2757	2759	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2773	2775	first strand
Strand 2	A	2876	2879	anti-parallel
Strand 3	A	2885	2887	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3020	3021	first strand
Strand 2	A	3024	3025	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2645	2646	first strand
Strand 2	B	2689	2692	anti-parallel
Strand 3	B	2700	2706	anti-parallel
Strand 4	B	2683	2686	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2645	2646	first strand
Strand 2	B	2689	2692	anti-parallel
Strand 3	B	2700	2706	anti-parallel
Strand 4	B	2711	2718	anti-parallel
Strand 5	B	2764	2768	anti-parallel
Strand 6	B	2757	2759	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2773	2775	first strand
Strand 2	B	2876	2879	anti-parallel
Strand 3	B	2885	2887	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3020	3021	first strand
Strand 2	B	3024	3025	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7NI6

Analysis of interatomic Contacts of Structural Units in PDB entry:
7NI6