Analysis of interatomic Contacts of Structural Units in PDB entry:
7NL2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NL2 entry

There are 2 chains in PDB entry 7NL2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 8SER 342
B
 GLN 8VAL 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7NL2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 16Right-handed alpha
Helix 2
AA2
A
27 32Right-handed 310
Helix 3
AA3
A
33 44Right-handed alpha
Helix 4
AA4
A
54 58Right-handed alpha
Helix 5
AA5
A
73 85Right-handed alpha
Helix 6
AA6
A
100 105Right-handed 310
Helix 7
AA7
A
113 132Right-handed alpha
Helix 8
AA8
A
157 163Right-handed alpha
Helix 9
AA9
A
166 179Right-handed alpha
Helix 10
AB1
A
193 210Right-handed alpha
Helix 11
AB2
A
228 240Right-handed alpha
Helix 12
AB3
A
270 291Right-handed alpha
Helix 13
AB4
A
304 312Right-handed 310
Helix 14
AB5
A
331 340Right-handed alpha
Helix 15
AB6
B
11 16Right-handed alpha
Helix 16
AB7
B
27 32Right-handed 310
Helix 17
AB8
B
33 44Right-handed alpha
Helix 18
AB9
B
54 58Right-handed alpha
Helix 19
AC1
B
73 85Right-handed alpha
Helix 20
AC2
B
100 105Right-handed 310
Helix 21
AC3
B
113 132Right-handed alpha
Helix 22
AC4
B
157 163Right-handed alpha
Helix 23
AC5
B
166 179Right-handed alpha
Helix 24
AC6
B
193 210Right-handed alpha
Helix 25
AC7
B
228 240Right-handed alpha
Helix 26
AC8
B
270 291Right-handed alpha
Helix 27
AC9
B
304 312Right-handed 310
Helix 28
AD1
B
331 340Right-handed alpha
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There are 4 sheets in PDB entry 7NL2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 224first strand
Strand 2
A
246 255parallel
Strand 3
A
295 300parallel
Strand 4
A
21 26parallel
Strand 5
A
46 49parallel
Strand 6
A
87 94parallel
Strand 7
A
138 143parallel
Strand 8
A
183 188parallel
Strand 9
A
216 219parallel
Strand 10
A
246 255parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
67 69anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 266first strand
Strand 2
B
67 70anti-parallel
Strand 3
B
59 61anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 224first strand
Strand 2
B
246 255parallel
Strand 3
B
295 300parallel
Strand 4
B
21 26parallel
Strand 5
B
46 49parallel
Strand 6
B
87 94parallel
Strand 7
B
138 143parallel
Strand 8
B
183 188parallel
Strand 9
B
216 219parallel
Strand 10
B
246 255parallel
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