Analysis of interatomic Contacts of Structural Units in PDB entry:
7NMI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NMI entry

There are 2 chains in PDB entry 7NMI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 19THR 55
B
 MET 1ASP 511
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7NMI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 26Right-handed alpha
Helix 2
AA2
A
36 44Right-handed alpha
Helix 3
AA3
A
46 54Right-handed alpha
Helix 4
AA4
B
2 20Right-handed alpha
Helix 5
AA5
B
29 41Right-handed alpha
Helix 6
AA6
B
52 62Right-handed alpha
Helix 7
AA7
B
71 92Right-handed alpha
Helix 8
AA8
B
105 122Right-handed alpha
Helix 9
AA9
B
132 144Right-handed alpha
Helix 10
AB1
B
155 165Right-handed alpha
Helix 11
AB2
B
174 194Right-handed alpha
Helix 12
AB3
B
206 220Right-handed alpha
Helix 13
AB4
B
224 233Right-handed alpha
Helix 14
AB5
B
236 252Right-handed alpha
Helix 15
AB6
B
254 263Right-handed alpha
Helix 16
AB7
B
264 276Right-handed alpha
Helix 17
AB8
B
277 291Right-handed alpha
Helix 18
AB9
B
296 307Right-handed alpha
Helix 19
AC1
B
308 324Right-handed alpha
Helix 20
AC2
B
326 335Right-handed alpha
Helix 21
AC3
B
336 348Right-handed alpha
Helix 22
AC4
B
359 374Right-handed alpha
Helix 23
AC5
B
381 392Right-handed alpha
Helix 24
AC6
B
393 408Right-handed alpha
Helix 25
AC7
B
411 420Right-handed alpha
Helix 26
AC8
B
421 452Right-handed alpha
Helix 27
AC9
B
456 468Right-handed alpha
Helix 28
AD1
B
471 484Right-handed alpha
Helix 29
AD2
B
486 495Right-handed alpha
Helix 30
AD3
B
496 508Right-handed alpha
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There are 2 sheets in PDB entry 7NMI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
69 70anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 125first strand
Strand 2
B
128 131anti-parallel
Strand 3
B
172 173anti-parallel
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