Analysis of interatomic Contacts of Structural Units in PDB entry:
7NN0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7NN0 entry

There are 4 chains in PDB entry 7NN0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 2	PRO 593
B	MET 0	PRO 593
C	VAL 2	PRO 593
D	VAL 2	PRO 593

There are 84 helices in PDB entry 7NN0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	35	Right-handed alpha
Helix 2	AA2	A	59	62	Right-handed 310
Helix 3	AA3	A	103	112	Right-handed alpha
Helix 4	AA4	A	116	126	Right-handed alpha
Helix 5	AA5	A	127	146	Right-handed alpha
Helix 6	AA6	A	147	149	Right-handed 310
Helix 7	AA7	A	261	264	Right-handed 310
Helix 8	AA8	A	265	273	Right-handed alpha
Helix 9	AA9	A	287	299	Right-handed alpha
Helix 10	AB1	A	310	325	Right-handed alpha
Helix 11	AB2	A	326	328	Right-handed 310
Helix 12	AB3	A	361	363	Right-handed 310
Helix 13	AB4	A	375	379	Right-handed 310
Helix 14	AB5	A	380	390	Right-handed alpha
Helix 15	AB6	A	418	422	Right-handed 310
Helix 16	AB7	A	423	432	Right-handed alpha
Helix 17	AB8	A	445	456	Right-handed alpha
Helix 18	AB9	A	490	503	Right-handed alpha
Helix 19	AC1	A	504	507	Right-handed 310
Helix 20	AC2	A	515	527	Right-handed alpha
Helix 21	AC3	A	557	566	Right-handed alpha
Helix 22	AC4	A	578	585	Right-handed alpha
Helix 23	AC5	B	26	35	Right-handed alpha
Helix 24	AC6	B	59	62	Right-handed 310
Helix 25	AC7	B	103	112	Right-handed alpha
Helix 26	AC8	B	116	126	Right-handed alpha
Helix 27	AC9	B	127	148	Right-handed alpha
Helix 28	AD1	B	262	264	Right-handed 310
Helix 29	AD2	B	265	273	Right-handed alpha
Helix 30	AD3	B	287	299	Right-handed alpha
Helix 31	AD4	B	310	325	Right-handed alpha
Helix 32	AD5	B	326	328	Right-handed 310
Helix 33	AD6	B	361	363	Right-handed 310
Helix 34	AD7	B	380	390	Right-handed alpha
Helix 35	AD8	B	418	422	Right-handed 310
Helix 36	AD9	B	423	432	Right-handed alpha
Helix 37	AE1	B	445	457	Right-handed alpha
Helix 38	AE2	B	489	503	Right-handed alpha
Helix 39	AE3	B	504	507	Right-handed 310
Helix 40	AE4	B	515	527	Right-handed alpha
Helix 41	AE5	B	533	537	Right-handed alpha
Helix 42	AE6	B	557	566	Right-handed alpha
Helix 43	AE7	B	578	585	Right-handed alpha
Helix 44	AE8	C	26	35	Right-handed alpha
Helix 45	AE9	C	103	112	Right-handed alpha
Helix 46	AF1	C	116	126	Right-handed alpha
Helix 47	AF2	C	127	147	Right-handed alpha
Helix 48	AF3	C	261	264	Right-handed 310
Helix 49	AF4	C	265	274	Right-handed alpha
Helix 50	AF5	C	287	299	Right-handed alpha
Helix 51	AF6	C	310	325	Right-handed alpha
Helix 52	AF7	C	326	329	Right-handed 310
Helix 53	AF8	C	361	363	Right-handed 310
Helix 54	AF9	C	375	379	Right-handed 310
Helix 55	AG1	C	380	390	Right-handed alpha
Helix 56	AG2	C	418	422	Right-handed 310
Helix 57	AG3	C	423	432	Right-handed alpha
Helix 58	AG4	C	445	456	Right-handed alpha
Helix 59	AG5	C	490	503	Right-handed alpha
Helix 60	AG6	C	504	507	Right-handed 310
Helix 61	AG7	C	515	527	Right-handed alpha
Helix 62	AG8	C	533	537	Right-handed alpha
Helix 63	AG9	C	557	566	Right-handed alpha
Helix 64	AH1	C	578	585	Right-handed alpha
Helix 65	AH2	D	26	35	Right-handed alpha
Helix 66	AH3	D	103	112	Right-handed alpha
Helix 67	AH4	D	116	126	Right-handed alpha
Helix 68	AH5	D	127	148	Right-handed alpha
Helix 69	AH6	D	260	264	Right-handed 310
Helix 70	AH7	D	265	273	Right-handed alpha
Helix 71	AH8	D	287	299	Right-handed alpha
Helix 72	AH9	D	310	325	Right-handed alpha
Helix 73	AI1	D	326	328	Right-handed 310
Helix 74	AI2	D	361	363	Right-handed 310
Helix 75	AI3	D	380	390	Right-handed alpha
Helix 76	AI4	D	418	422	Right-handed 310
Helix 77	AI5	D	423	432	Right-handed alpha
Helix 78	AI6	D	445	456	Right-handed alpha
Helix 79	AI7	D	489	503	Right-handed alpha
Helix 80	AI8	D	504	507	Right-handed 310
Helix 81	AI9	D	515	527	Right-handed alpha
Helix 82	AJ1	D	533	537	Right-handed alpha
Helix 83	AJ2	D	557	566	Right-handed alpha
Helix 84	AJ3	D	578	585	Right-handed alpha

There are 35 sheets in PDB entry 7NN0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	4	first strand
Strand 2	A	11	12	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	16	first strand
Strand 2	A	42	43	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	69	71	first strand
Strand 2	A	64	66	anti-parallel
Strand 3	A	81	82	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	88	89	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	152	157	first strand
Strand 2	A	162	167	anti-parallel
Strand 3	A	209	213	anti-parallel
Strand 4	A	192	201	anti-parallel
Strand 5	A	182	187	anti-parallel
Strand 6	A	224	227	anti-parallel
Strand 7	A	152	157	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	348	first strand
Strand 2	A	330	333	parallel
Strand 3	A	355	359	parallel
Strand 4	A	304	308	parallel
Strand 5	A	366	373	parallel
Strand 6	A	391	400	parallel
Strand 7	A	277	281	parallel
Strand 8	A	436	437	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	440	441	first strand
Strand 2	A	462	463	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	530	532	first strand
Strand 2	A	510	513	parallel
Strand 3	A	541	547	parallel
Strand 4	A	568	576	parallel
Strand 5	A	471	475	parallel
Strand 6	A	588	589	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	486	489	first strand
Strand 2	A	479	483	anti-parallel
Strand 3	C	479	482	anti-parallel
Strand 4	C	487	489	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	4	first strand
Strand 2	B	11	12	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	25	first strand
Strand 2	B	14	16	anti-parallel
Strand 3	B	42	43	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	71	first strand
Strand 2	B	64	66	anti-parallel
Strand 3	B	81	82	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	88	89	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	157	first strand
Strand 2	B	162	167	anti-parallel
Strand 3	B	209	213	anti-parallel
Strand 4	B	192	201	anti-parallel
Strand 5	B	182	187	anti-parallel
Strand 6	B	224	227	anti-parallel
Strand 7	B	152	157	anti-parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	348	first strand
Strand 2	B	330	333	parallel
Strand 3	B	355	359	parallel
Strand 4	B	304	308	parallel
Strand 5	B	366	374	parallel
Strand 6	B	391	400	parallel
Strand 7	B	277	281	parallel
Strand 8	B	436	437	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	440	441	first strand
Strand 2	B	462	463	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	530	532	first strand
Strand 2	B	510	513	parallel
Strand 3	B	541	547	parallel
Strand 4	B	568	576	parallel
Strand 5	B	471	475	parallel
Strand 6	B	588	589	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	481	482	first strand
Strand 2	B	487	488	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	4	first strand
Strand 2	C	11	12	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	16	first strand
Strand 2	C	42	43	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	69	71	first strand
Strand 2	C	64	66	anti-parallel
Strand 3	C	80	82	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	88	89	anti-parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	152	157	first strand
Strand 2	C	162	167	anti-parallel
Strand 3	C	209	213	anti-parallel
Strand 4	C	192	201	anti-parallel
Strand 5	C	182	187	anti-parallel
Strand 6	C	224	227	anti-parallel
Strand 7	C	152	157	anti-parallel

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There are 8 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	348	first strand
Strand 2	C	331	333	parallel
Strand 3	C	355	359	parallel
Strand 4	C	304	308	parallel
Strand 5	C	366	374	parallel
Strand 6	C	391	400	parallel
Strand 7	C	277	281	parallel
Strand 8	C	436	437	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	440	441	first strand
Strand 2	C	462	463	parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	530	532	first strand
Strand 2	C	509	513	parallel
Strand 3	C	541	547	parallel
Strand 4	C	568	576	parallel
Strand 5	C	471	475	parallel
Strand 6	C	588	589	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	4	first strand
Strand 2	D	11	12	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	16	first strand
Strand 2	D	42	43	anti-parallel
Strand 3	D	47	48	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	69	71	first strand
Strand 2	D	64	66	anti-parallel
Strand 3	D	81	82	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	85	first strand
Strand 2	D	88	89	anti-parallel

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There are 7 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	157	first strand
Strand 2	D	162	167	anti-parallel
Strand 3	D	209	213	anti-parallel
Strand 4	D	192	201	anti-parallel
Strand 5	D	182	187	anti-parallel
Strand 6	D	224	227	anti-parallel
Strand 7	D	152	157	anti-parallel

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There are 8 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	348	first strand
Strand 2	D	330	333	parallel
Strand 3	D	355	359	parallel
Strand 4	D	304	308	parallel
Strand 5	D	366	374	parallel
Strand 6	D	391	400	parallel
Strand 7	D	277	281	parallel
Strand 8	D	436	437	parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	440	441	first strand
Strand 2	D	462	463	parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	530	532	first strand
Strand 2	D	510	513	parallel
Strand 3	D	541	547	parallel
Strand 4	D	568	576	parallel
Strand 5	D	471	475	parallel
Strand 6	D	588	589	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	481	482	first strand
Strand 2	D	487	488	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7NN0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7NN0