Analysis of interatomic Contacts of Structural Units in PDB entry:
7NOX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NOX entry

There are 2 chains in PDB entry 7NOX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 39ASN 558
B
 ASP 40GLN 559
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 7NOX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 55Right-handed alpha
Helix 2
AA2
A
55 65Right-handed alpha
Helix 3
AA3
A
65 70Right-handed alpha
Helix 4
AA4
A
76 82Right-handed alpha
Helix 5
AA5
A
89 94Right-handed alpha
Helix 6
AA6
A
94 103Right-handed alpha
Helix 7
AA7
A
103 116Right-handed alpha
Helix 8
AA8
A
118 120Right-handed 310
Helix 9
AA9
A
121 144Right-handed alpha
Helix 10
AB1
A
166 185Right-handed alpha
Helix 11
AB2
A
201 220Right-handed alpha
Helix 12
AB3
A
224 238Right-handed alpha
Helix 13
AB4
A
245 249Right-handed 310
Helix 14
AB5
A
262 268Right-handed 310
Helix 15
AB6
A
272 280Right-handed alpha
Helix 16
AB7
A
291 301Right-handed alpha
Helix 17
AB8
A
305 309Right-handed alpha
Helix 18
AB9
A
329 337Right-handed alpha
Helix 19
AC1
A
359 367Right-handed alpha
Helix 20
AC2
A
377 381Right-handed 310
Helix 21
AC3
A
386 389Right-handed 310
Helix 22
AC4
A
399 413Right-handed alpha
Helix 23
AC5
A
421 442Right-handed alpha
Helix 24
AC6
A
447 457Right-handed alpha
Helix 25
AC7
A
464 480Right-handed alpha
Helix 26
AC8
A
483 495Right-handed alpha
Helix 27
AC9
A
501 506Right-handed 310
Helix 28
AD1
A
507 511Right-handed 310
Helix 29
AD2
A
524 531Right-handed alpha
Helix 30
AD3
A
531 541Right-handed alpha
Helix 31
AD4
B
41 55Right-handed alpha
Helix 32
AD5
B
55 65Right-handed alpha
Helix 33
AD6
B
65 70Right-handed alpha
Helix 34
AD7
B
76 82Right-handed alpha
Helix 35
AD8
B
89 94Right-handed alpha
Helix 36
AD9
B
94 103Right-handed alpha
Helix 37
AE1
B
103 116Right-handed alpha
Helix 38
AE2
B
118 120Right-handed 310
Helix 39
AE3
B
121 144Right-handed alpha
Helix 40
AE4
B
153 158Right-handed alpha
Helix 41
AE5
B
166 185Right-handed alpha
Helix 42
AE6
B
201 220Right-handed alpha
Helix 43
AE7
B
224 238Right-handed alpha
Helix 44
AE8
B
245 249Right-handed 310
Helix 45
AE9
B
262 268Right-handed 310
Helix 46
AF1
B
272 280Right-handed alpha
Helix 47
AF2
B
291 301Right-handed alpha
Helix 48
AF3
B
305 309Right-handed alpha
Helix 49
AF4
B
329 337Right-handed alpha
Helix 50
AF5
B
359 367Right-handed alpha
Helix 51
AF6
B
377 381Right-handed 310
Helix 52
AF7
B
386 389Right-handed 310
Helix 53
AF8
B
399 413Right-handed alpha
Helix 54
AF9
B
421 442Right-handed alpha
Helix 55
AG1
B
447 456Right-handed alpha
Helix 56
AG2
B
464 480Right-handed alpha
Helix 57
AG3
B
483 495Right-handed alpha
Helix 58
AG4
B
501 506Right-handed 310
Helix 59
AG5
B
507 511Right-handed 310
Helix 60
AG6
B
526 531Right-handed alpha
Helix 61
AG7
B
531 542Right-handed alpha
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There are 8 sheets in PDB entry 7NOX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 252first strand
Strand 2
A
395 398anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 311first strand
Strand 2
A
383 384anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 314first strand
Strand 2
A
327 328anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 358first strand
Strand 2
A
375 376anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
250 252first strand
Strand 2
B
395 398anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
310 311first strand
Strand 2
B
383 384anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
313 314first strand
Strand 2
B
327 328anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
357 358first strand
Strand 2
B
375 376anti-parallel
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