Analysis of interatomic Contacts of Structural Units in PDB entry:
7NP0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NP0 entry

There are 5 chains in PDB entry 7NP0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0SER 307
B
 VAL 1SER 307
C
 VAL 1SER 307
D
 VAL 1SER 307
E
 VAL 1SER 124
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 7NP0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 11Right-handed 310
Helix 2
AA2
A
12 29Right-handed alpha
Helix 3
AA3
A
50 64Right-handed alpha
Helix 4
AA4
A
83 94Right-handed alpha
Helix 5
AA5
A
104 115Right-handed alpha
Helix 6
AA6
A
128 144Right-handed alpha
Helix 7
AA7
A
159 172Right-handed alpha
Helix 8
AA8
A
187 202Right-handed alpha
Helix 9
AA9
A
210 216Right-handed alpha
Helix 10
AB1
A
228 232Right-handed 310
Helix 11
AB2
A
239 246Right-handed 310
Helix 12
AB3
A
248 255Right-handed alpha
Helix 13
AB4
A
274 279Right-handed alpha
Helix 14
AB5
A
284 307Right-handed alpha
Helix 15
AB6
B
7 11Right-handed 310
Helix 16
AB7
B
12 29Right-handed alpha
Helix 17
AB8
B
50 64Right-handed alpha
Helix 18
AB9
B
83 94Right-handed alpha
Helix 19
AC1
B
104 115Right-handed alpha
Helix 20
AC2
B
128 144Right-handed alpha
Helix 21
AC3
B
159 172Right-handed alpha
Helix 22
AC4
B
187 202Right-handed alpha
Helix 23
AC5
B
210 216Right-handed alpha
Helix 24
AC6
B
239 246Right-handed 310
Helix 25
AC7
B
248 253Right-handed alpha
Helix 26
AC8
B
274 279Right-handed alpha
Helix 27
AC9
B
284 306Right-handed alpha
Helix 28
AD1
C
7 11Right-handed 310
Helix 29
AD2
C
12 29Right-handed alpha
Helix 30
AD3
C
50 64Right-handed alpha
Helix 31
AD4
C
83 94Right-handed alpha
Helix 32
AD5
C
104 115Right-handed alpha
Helix 33
AD6
C
128 144Right-handed alpha
Helix 34
AD7
C
159 172Right-handed alpha
Helix 35
AD8
C
187 202Right-handed alpha
Helix 36
AD9
C
210 216Right-handed alpha
Helix 37
AE1
C
228 232Right-handed 310
Helix 38
AE2
C
239 246Right-handed 310
Helix 39
AE3
C
248 255Right-handed alpha
Helix 40
AE4
C
274 280Right-handed alpha
Helix 41
AE5
C
284 307Right-handed alpha
Helix 42
AE6
D
7 11Right-handed 310
Helix 43
AE7
D
12 29Right-handed alpha
Helix 44
AE8
D
50 64Right-handed alpha
Helix 45
AE9
D
83 95Right-handed alpha
Helix 46
AF1
D
104 115Right-handed alpha
Helix 47
AF2
D
128 144Right-handed alpha
Helix 48
AF3
D
159 172Right-handed alpha
Helix 49
AF4
D
187 202Right-handed alpha
Helix 50
AF5
D
210 216Right-handed alpha
Helix 51
AF6
D
239 246Right-handed 310
Helix 52
AF7
D
248 255Right-handed alpha
Helix 53
AF8
D
274 280Right-handed alpha
Helix 54
AF9
D
284 307Right-handed alpha
Helix 55
AG1
E
7 11Right-handed 310
Helix 56
AG2
E
12 29Right-handed alpha
Helix 57
AG3
E
50 64Right-handed alpha
Helix 58
AG4
E
83 94Right-handed alpha
Helix 59
AG5
E
104 115Right-handed alpha
Helix 60
AG6
E
128 144Right-handed alpha
Helix 61
AG7
E
159 172Right-handed alpha
Helix 62
AG8
E
187 202Right-handed alpha
Helix 63
AG9
E
210 216Right-handed alpha
Helix 64
AH1
E
239 246Right-handed 310
Helix 65
AH2
E
248 254Right-handed alpha
Helix 66
AH3
E
274 280Right-handed alpha
Helix 67
AH4
E
284 307Right-handed alpha
Helix 68
AH5
F
7 11Right-handed 310
Helix 69
AH6
F
12 29Right-handed alpha
Helix 70
AH7
F
50 64Right-handed alpha
Helix 71
AH8
F
83 94Right-handed alpha
Helix 72
AH9
F
104 115Right-handed alpha
Helix 73
AI1
F
128 144Right-handed alpha
Helix 74
AI2
F
159 172Right-handed alpha
Helix 75
AI3
F
181 185Right-handed 310
Helix 76
AI4
F
187 202Right-handed alpha
Helix 77
AI5
F
210 216Right-handed alpha
Helix 78
AI6
F
239 246Right-handed 310
Helix 79
AI7
F
248 255Right-handed alpha
Helix 80
AI8
F
274 279Right-handed alpha
Helix 81
AI9
F
284 307Right-handed alpha
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There are 12 sheets in PDB entry 7NP0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 71first strand
Strand 2
A
41 46parallel
Strand 3
A
95 101parallel
Strand 4
A
119 123parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 208first strand
Strand 2
A
175 179parallel
Strand 3
A
150 154parallel
Strand 4
A
220 223parallel
Strand 5
A
260 263parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 71first strand
Strand 2
B
41 46parallel
Strand 3
B
95 101parallel
Strand 4
B
119 121parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 208first strand
Strand 2
B
175 179parallel
Strand 3
B
150 154parallel
Strand 4
B
220 223parallel
Strand 5
B
260 263parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
67 71first strand
Strand 2
C
41 46parallel
Strand 3
C
95 101parallel
Strand 4
C
119 123parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
204 208first strand
Strand 2
C
175 179parallel
Strand 3
C
150 154parallel
Strand 4
C
220 223parallel
Strand 5
C
260 263parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
67 71first strand
Strand 2
D
41 46parallel
Strand 3
D
98 101parallel
Strand 4
D
119 123parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
204 208first strand
Strand 2
D
175 179parallel
Strand 3
D
150 154parallel
Strand 4
D
220 223parallel
Strand 5
D
260 263parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
67 71first strand
Strand 2
E
41 46parallel
Strand 3
E
95 101parallel
Strand 4
E
119 123parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
204 208first strand
Strand 2
E
175 179parallel
Strand 3
E
150 154parallel
Strand 4
E
220 223parallel
Strand 5
E
260 263parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
67 71first strand
Strand 2
F
41 46parallel
Strand 3
F
95 101parallel
Strand 4
F
119 121parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
204 208first strand
Strand 2
F
175 179parallel
Strand 3
F
150 154parallel
Strand 4
F
220 223parallel
Strand 5
F
260 263parallel
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