Analysis of interatomic Contacts of Structural Units in PDB entry:
7NRT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7NRT entry

There are 10 chains in PDB entry 7NRT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 304	GLU 380
I	GLY 304	GLU 380
B	GLY 304	GLU 380
D	GLY 304	GLU 380
F	GLY 304	GLU 380
H	GLY 304	GLU 380
C	GLY 304	GLU 380
E	GLY 304	GLU 380
G	GLY 304	GLU 380
J	GLY 304	GLU 380

There are no helices in PDB entry 7NRT

There are 18 sheets in PDB entry 7NRT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	306	310	first strand
Strand 2	B	306	310	parallel
Strand 3	A	306	310	parallel
Strand 4	F	306	310	parallel
Strand 5	H	306	310	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	314	first strand
Strand 2	B	313	314	parallel
Strand 3	A	313	314	parallel
Strand 4	F	313	314	parallel
Strand 5	H	313	314	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	318	325	first strand
Strand 2	B	318	325	parallel
Strand 3	A	318	325	parallel
Strand 4	F	318	325	parallel
Strand 5	H	318	325	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	328	330	first strand
Strand 2	B	328	330	parallel
Strand 3	A	328	330	parallel
Strand 4	F	328	330	parallel
Strand 5	H	328	330	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	336	340	first strand
Strand 2	B	336	340	parallel
Strand 3	A	336	340	parallel
Strand 4	F	336	340	parallel
Strand 5	H	336	340	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	343	344	first strand
Strand 2	B	343	344	parallel
Strand 3	A	343	344	parallel
Strand 4	F	343	344	parallel
Strand 5	H	343	344	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	349	351	first strand
Strand 2	B	349	351	parallel
Strand 3	A	349	351	parallel
Strand 4	F	349	351	parallel
Strand 5	H	349	351	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	354	362	first strand
Strand 2	B	354	362	parallel
Strand 3	A	354	362	parallel
Strand 4	F	354	362	parallel
Strand 5	H	354	362	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	369	371	first strand
Strand 2	B	369	371	parallel
Strand 3	A	369	371	parallel
Strand 4	F	369	371	parallel
Strand 5	H	369	371	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	374	378	first strand
Strand 2	B	374	378	parallel
Strand 3	A	374	378	parallel
Strand 4	F	374	378	parallel
Strand 5	H	374	378	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	306	310	first strand
Strand 2	C	306	310	parallel
Strand 3	I	306	310	parallel
Strand 4	G	306	310	parallel
Strand 5	J	306	310	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	313	314	first strand
Strand 2	C	313	314	parallel
Strand 3	I	313	314	parallel
Strand 4	G	313	314	parallel
Strand 5	J	313	314	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	318	322	first strand
Strand 2	C	318	322	parallel
Strand 3	I	318	322	parallel
Strand 4	G	318	322	parallel
Strand 5	J	318	322	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	328	330	first strand
Strand 2	C	328	330	parallel
Strand 3	I	328	330	parallel
Strand 4	G	328	330	parallel
Strand 5	J	328	330	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	336	342	first strand
Strand 2	C	336	342	parallel
Strand 3	I	336	342	parallel
Strand 4	G	336	342	parallel
Strand 5	J	336	342	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	349	362	first strand
Strand 2	C	349	362	parallel
Strand 3	I	349	362	parallel
Strand 4	G	349	362	parallel
Strand 5	J	349	362	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	369	373	first strand
Strand 2	C	369	373	parallel
Strand 3	I	369	373	parallel
Strand 4	G	369	373	parallel
Strand 5	J	369	373	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	376	378	first strand
Strand 2	C	376	378	parallel
Strand 3	I	376	378	parallel
Strand 4	G	376	378	parallel
Strand 5	J	376	378	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7NRT

Analysis of interatomic Contacts of Structural Units in PDB entry:
7NRT