Analysis of interatomic Contacts of Structural Units in PDB entry:
7NTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NTE entry

There are 2 chains in PDB entry 7NTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1LEU 327
B
 GLN 1LEU 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7NTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 23Right-handed alpha
Helix 2
AA2
A
23 35Right-handed alpha
Helix 3
AA3
A
52 54Right-handed 310
Helix 4
AA4
A
55 62Right-handed alpha
Helix 5
AA5
A
73 75Right-handed 310
Helix 6
AA6
A
81 87Right-handed 310
Helix 7
AA7
A
93 109Right-handed alpha
Helix 8
AA8
A
138 143Right-handed 310
Helix 9
AA9
A
151 162Right-handed alpha
Helix 10
AB1
A
169 171Right-handed 310
Helix 11
AB2
A
172 179Right-handed alpha
Helix 12
AB3
A
188 195Right-handed alpha
Helix 13
AB4
A
224 230Right-handed alpha
Helix 14
AB5
A
234 240Right-handed alpha
Helix 15
AB6
A
243 268Right-handed alpha
Helix 16
AB7
A
278 303Right-handed alpha
Helix 17
AB8
A
306 327Right-handed alpha
Helix 18
AB9
B
17 23Right-handed alpha
Helix 19
AC1
B
23 35Right-handed alpha
Helix 20
AC2
B
52 54Right-handed 310
Helix 21
AC3
B
55 62Right-handed alpha
Helix 22
AC4
B
73 75Right-handed 310
Helix 23
AC5
B
80 87Right-handed 310
Helix 24
AC6
B
93 109Right-handed alpha
Helix 25
AC7
B
138 143Right-handed 310
Helix 26
AC8
B
151 162Right-handed alpha
Helix 27
AC9
B
169 171Right-handed 310
Helix 28
AD1
B
172 179Right-handed alpha
Helix 29
AD2
B
188 195Right-handed alpha
Helix 30
AD3
B
224 230Right-handed alpha
Helix 31
AD4
B
234 240Right-handed alpha
Helix 32
AD5
B
243 267Right-handed alpha
Helix 33
AD6
B
278 303Right-handed alpha
Helix 34
AD7
B
306 327Right-handed alpha
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There are 4 sheets in PDB entry 7NTE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 44first strand
Strand 2
A
5 10parallel
Strand 3
A
67 71parallel
Strand 4
A
217 223anti-parallel
Strand 5
A
116 123anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
146 148parallel
Strand 3
A
184 187parallel
Strand 4
A
128 131anti-parallel
Strand 5
A
203 206anti-parallel
Strand 6
A
273 276parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 44first strand
Strand 2
B
5 11parallel
Strand 3
B
67 71parallel
Strand 4
B
217 223anti-parallel
Strand 5
B
116 123anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 165first strand
Strand 2
B
146 148parallel
Strand 3
B
184 187parallel
Strand 4
B
128 131anti-parallel
Strand 5
B
203 206anti-parallel
Strand 6
B
273 276parallel
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