Analysis of interatomic Contacts of Structural Units in PDB entry:
7NUX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NUX entry

There is 1 chain in PDB entry 7NUX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 624GLN 783
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 7NUX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
627 631Right-handed 310
Helix 2
AA2
A
644 646Right-handed 310
Helix 3
AA3
A
647 654Right-handed alpha
Helix 4
AA4
A
654 661Right-handed alpha
Helix 5
AA5
A
678 689Right-handed alpha
Helix 6
AA6
A
698 705Right-handed alpha
Helix 7
AA7
A
705 714Right-handed alpha
Helix 8
AA8
A
743 751Right-handed alpha
Helix 9
AA9
A
761 763Right-handed 310
Helix 10
AB1
A
764 778Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7NUX.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 668first strand
Strand 2
A
637 642parallel
Strand 3
A
690 697parallel
Strand 4
A
726 730parallel
Strand 5
A
756 757parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il