Analysis of interatomic Contacts of Structural Units in PDB entry:
7NVV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NVV entry

There are 8 chains in PDB entry 7NVV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
2
 VAL 145GLN 458
5
 ASN 3LEU 68
7
 THR 51THR 720
N
 T 34 G 58
T
 C -58 A -34
W
 ALA 274GLY 288
Y
 UNK 1UNK 8
Z
 UNK 4UNK 19
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 7NVV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
2
145 164Right-handed alpha
Helix 2
AA2
2
172 181Right-handed alpha
Helix 3
AA3
2
197 206Right-handed alpha
Helix 4
AA4
2
207 227Right-handed alpha
Helix 5
AA5
2
229 242Right-handed alpha
Helix 6
AA6
2
256 268Right-handed alpha
Helix 7
AA7
2
284 289Right-handed alpha
Helix 8
AA8
2
321 331Right-handed alpha
Helix 9
AA9
2
347 358Right-handed alpha
Helix 10
AB1
2
360 371Right-handed alpha
Helix 11
AB2
2
373 379Right-handed alpha
Helix 12
AB3
2
384 399Right-handed alpha
Helix 13
AB4
2
414 429Right-handed alpha
Helix 14
AB5
2
447 458Right-handed alpha
Helix 15
AB6
5
13 27Right-handed alpha
Helix 16
AB7
5
49 64Right-handed alpha
Helix 17
AB8
7
92 104Right-handed alpha
Helix 18
AB9
7
119 130Right-handed alpha
Helix 19
AC1
7
132 144Right-handed alpha
Helix 20
AC2
7
149 159Right-handed alpha
Helix 21
AC3
7
181 191Right-handed alpha
Helix 22
AC4
7
191 197Right-handed alpha
Helix 23
AC5
7
273 275Right-handed 310
Helix 24
AC6
7
276 287Right-handed alpha
Helix 25
AC7
7
296 300Right-handed 310
Helix 26
AC8
7
317 328Right-handed alpha
Helix 27
AC9
7
345 358Right-handed alpha
Helix 28
AD1
7
367 382Right-handed alpha
Helix 29
AD2
7
410 415Right-handed alpha
Helix 30
AD3
7
420 432Right-handed alpha
Helix 31
AD4
7
443 446Right-handed 310
Helix 32
AD5
7
452 458Right-handed alpha
Helix 33
AD6
7
476 478Right-handed 310
Helix 34
AD7
7
479 484Right-handed alpha
Helix 35
AD8
7
492 499Right-handed alpha
Helix 36
AD9
7
515 525Right-handed alpha
Helix 37
AE1
7
529 536Right-handed alpha
Helix 38
AE2
7
537 553Right-handed alpha
Helix 39
AE3
7
564 576Right-handed alpha
Helix 40
AE4
7
585 599Right-handed alpha
Helix 41
AE5
7
609 613Right-handed 310
Helix 42
AE6
7
632 641Right-handed alpha
Helix 43
AE7
7
642 644Right-handed 310
Helix 44
AE8
7
667 677Right-handed alpha
Helix 45
AE9
7
677 683Right-handed alpha
Helix 46
AF1
7
705 720Right-handed alpha
Helix 47
AF2
W
278 283Right-handed alpha
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There are 11 sheets in PDB entry 7NVV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
185 186first strand
Strand 2
2
195 196anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
271 272first strand
Strand 2
2
282 283anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
307 309first strand
Strand 2
2
314 317anti-parallel
Strand 3
2
341 345anti-parallel
Strand 4
2
333 338anti-parallel
Strand 5
7
59 60parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
431 435first strand
Strand 2
2
440 443anti-parallel
Strand 3
2
402 409anti-parallel
Strand 4
5
4 11anti-parallel
Strand 5
5
42 45anti-parallel
Strand 6
5
34 37anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
76 78first strand
Strand 2
7
83 87anti-parallel
Strand 3
7
113 117anti-parallel
Strand 4
7
105 108anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
268 272first strand
Strand 2
7
174 179anti-parallel
Strand 3
7
166 171anti-parallel
Strand 4
7
291 292parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
294 295first strand
Strand 2
7
333 334anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
389 392first strand
Strand 2
7
405 409parallel
Strand 3
7
361 365parallel
Strand 4
7
437 441parallel
Strand 5
7
463 467parallel
Strand 6
7
336 339parallel
Strand 7
7
487 490parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
434 435first strand
Strand 2
7
459 460parallel
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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
579 580first strand
Strand 2
7
604 607parallel
Strand 3
7
558 561parallel
Strand 4
7
622 625parallel
Strand 5
7
657 661parallel
Strand 6
7
505 512parallel
Strand 7
7
663 664parallel
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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
7
579 580first strand
Strand 2
7
604 607parallel
Strand 3
7
558 561parallel
Strand 4
7
622 625parallel
Strand 5
7
657 661parallel
Strand 6
7
505 512parallel
Strand 7
7
688 690parallel
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