Analysis of interatomic Contacts of Structural Units in PDB entry:
7NVW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7NVW entry

There are 13 chains in PDB entry 7NVW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
0	MET 1	PHE 728
1	ALA 107	LYS 547
2	ASN 18	GLN 458
3	MET 1	GLU 149
4	LEU 8	SER 292
5	ASN 3	LEU 68
6	ARG 7	HIS 387
7	THR 51	THR 720
N	T 34	G 54
T	C -54	A -34
W	ALA 274	GLY 288
Y	UNK 1	UNK 8
Z	UNK 1	UNK 19

There are130 helices in PDB entry 7NVW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	0	18	35	Right-handed alpha
Helix 2	AA2	0	47	63	Right-handed alpha
Helix 3	AA3	0	76	99	Right-handed alpha
Helix 4	AA4	0	126	139	Right-handed alpha
Helix 5	AA5	0	139	149	Right-handed alpha
Helix 6	AA6	0	155	165	Right-handed alpha
Helix 7	AA7	0	176	188	Right-handed alpha
Helix 8	AA8	0	190	199	Right-handed alpha
Helix 9	AA9	0	200	202	Right-handed 310
Helix 10	AB1	0	208	212	Right-handed 310
Helix 11	AB2	0	214	222	Right-handed alpha
Helix 12	AB3	0	223	227	Right-handed 310
Helix 13	AB4	0	238	246	Right-handed alpha
Helix 14	AB5	0	253	277	Right-handed alpha
Helix 15	AB6	0	278	291	Right-handed alpha
Helix 16	AB7	0	325	346	Right-handed alpha
Helix 17	AB8	0	353	366	Right-handed alpha
Helix 18	AB9	0	368	374	Right-handed alpha
Helix 19	AC1	0	374	386	Right-handed alpha
Helix 20	AC2	0	394	410	Right-handed alpha
Helix 21	AC3	0	440	451	Right-handed alpha
Helix 22	AC4	0	465	471	Right-handed alpha
Helix 23	AC5	0	513	531	Right-handed alpha
Helix 24	AC6	0	541	555	Right-handed alpha
Helix 25	AC7	0	556	565	Right-handed alpha
Helix 26	AC8	0	573	590	Right-handed alpha
Helix 27	AC9	0	602	608	Right-handed alpha
Helix 28	AD1	0	630	643	Right-handed alpha
Helix 29	AD2	0	647	663	Right-handed alpha
Helix 30	AD3	0	681	685	Right-handed 310
Helix 31	AD4	0	686	693	Right-handed alpha
Helix 32	AD5	0	694	701	Right-handed alpha
Helix 33	AD6	0	710	726	Right-handed alpha
Helix 34	AD7	1	108	120	Right-handed alpha
Helix 35	AD8	1	121	134	Right-handed alpha
Helix 36	AD9	1	139	146	Right-handed alpha
Helix 37	AE1	1	191	200	Right-handed alpha
Helix 38	AE2	1	200	210	Right-handed alpha
Helix 39	AE3	1	216	226	Right-handed alpha
Helix 40	AE4	1	298	318	Right-handed alpha
Helix 41	AE5	1	379	384	Right-handed alpha
Helix 42	AE6	1	397	409	Right-handed alpha
Helix 43	AE7	1	410	413	Right-handed 310
Helix 44	AE8	1	423	435	Right-handed alpha
Helix 45	AE9	1	455	478	Right-handed alpha
Helix 46	AF1	1	485	515	Right-handed alpha
Helix 47	AF2	1	523	547	Right-handed alpha
Helix 48	AF3	2	19	25	Right-handed alpha
Helix 49	AF4	2	27	35	Right-handed alpha
Helix 50	AF5	2	39	48	Right-handed alpha
Helix 51	AF6	2	51	59	Right-handed alpha
Helix 52	AF7	2	67	73	Right-handed alpha
Helix 53	AF8	2	79	94	Right-handed alpha
Helix 54	AF9	2	111	122	Right-handed alpha
Helix 55	AG1	2	146	164	Right-handed alpha
Helix 56	AG2	2	172	182	Right-handed alpha
Helix 57	AG3	2	197	206	Right-handed alpha
Helix 58	AG4	2	207	227	Right-handed alpha
Helix 59	AG5	2	229	241	Right-handed alpha
Helix 60	AG6	2	256	269	Right-handed alpha
Helix 61	AG7	2	284	289	Right-handed alpha
Helix 62	AG8	2	321	330	Right-handed alpha
Helix 63	AG9	2	347	358	Right-handed alpha
Helix 64	AH1	2	360	371	Right-handed alpha
Helix 65	AH2	2	373	378	Right-handed 310
Helix 66	AH3	2	384	399	Right-handed alpha
Helix 67	AH4	2	414	429	Right-handed alpha
Helix 68	AH5	2	444	458	Right-handed alpha
Helix 69	AH6	3	11	16	Right-handed alpha
Helix 70	AH7	3	31	41	Right-handed alpha
Helix 71	AH8	3	65	80	Right-handed alpha
Helix 72	AH9	3	85	89	Right-handed 310
Helix 73	AI1	3	93	111	Right-handed alpha
Helix 74	AI2	3	114	129	Right-handed alpha
Helix 75	AI3	3	131	149	Right-handed alpha
Helix 76	AI4	4	18	29	Right-handed alpha
Helix 77	AI5	4	33	52	Right-handed alpha
Helix 78	AI6	4	101	121	Right-handed alpha
Helix 79	AI7	4	133	151	Right-handed alpha
Helix 80	AI8	4	170	172	Right-handed 310
Helix 81	AI9	4	173	188	Right-handed alpha
Helix 82	AJ1	4	200	211	Right-handed alpha
Helix 83	AJ2	4	219	221	Right-handed 310
Helix 84	AJ3	4	222	230	Right-handed alpha
Helix 85	AJ4	4	234	239	Right-handed alpha
Helix 86	AJ5	5	13	27	Right-handed alpha
Helix 87	AJ6	5	49	64	Right-handed alpha
Helix 88	AJ7	6	9	14	Right-handed alpha
Helix 89	AJ8	6	17	21	Right-handed 310
Helix 90	AJ9	6	68	73	Right-handed 310
Helix 91	AK1	6	79	98	Right-handed alpha
Helix 92	AK2	6	123	135	Right-handed alpha
Helix 93	AK3	6	144	158	Right-handed alpha
Helix 94	AK4	6	181	193	Right-handed alpha
Helix 95	AK5	6	205	216	Right-handed alpha
Helix 96	AK6	6	224	237	Right-handed alpha
Helix 97	AK7	6	314	320	Right-handed alpha
Helix 98	AK8	6	321	326	Right-handed alpha
Helix 99	AK9	6	368	378	Right-handed alpha
Helix 100	AL1	6	382	387	Right-handed alpha
Helix 101	AL2	7	92	104	Right-handed alpha
Helix 102	AL3	7	119	129	Right-handed alpha
Helix 103	AL4	7	132	144	Right-handed alpha
Helix 104	AL5	7	149	162	Right-handed alpha
Helix 105	AL6	7	181	189	Right-handed alpha
Helix 106	AL7	7	192	198	Right-handed alpha
Helix 107	AL8	7	276	287	Right-handed alpha
Helix 108	AL9	7	317	328	Right-handed alpha
Helix 109	AM1	7	341	344	Right-handed 310
Helix 110	AM2	7	345	358	Right-handed alpha
Helix 111	AM3	7	367	382	Right-handed alpha
Helix 112	AM4	7	385	387	Right-handed 310
Helix 113	AM5	7	410	414	Right-handed alpha
Helix 114	AM6	7	420	433	Right-handed alpha
Helix 115	AM7	7	443	446	Right-handed 310
Helix 116	AM8	7	448	458	Right-handed alpha
Helix 117	AM9	7	478	484	Right-handed alpha
Helix 118	AN1	7	492	499	Right-handed alpha
Helix 119	AN2	7	515	525	Right-handed alpha
Helix 120	AN3	7	529	535	Right-handed alpha
Helix 121	AN4	7	537	553	Right-handed alpha
Helix 122	AN5	7	564	576	Right-handed alpha
Helix 123	AN6	7	585	599	Right-handed alpha
Helix 124	AN7	7	609	614	Right-handed alpha
Helix 125	AN8	7	632	641	Right-handed alpha
Helix 126	AN9	7	667	677	Right-handed alpha
Helix 127	AO1	7	677	684	Right-handed alpha
Helix 128	AO2	7	705	720	Right-handed alpha
Helix 129	AO3	W	278	283	Right-handed alpha
Helix 130	AO4	Z	7	11	Right-handed 310

There are 24 sheets in PDB entry 7NVW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	0	3	4	first strand
Strand 2	0	9	10	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Initial residue	Terminal residue	Strand sense
Strand 1	38	41	first strand
Strand 2	453	458	parallel
Strand 3	230	234	parallel
Strand 4	70	73	parallel
Strand 5	204	206	parallel
Strand 6	105	108	parallel
Strand 7	173	175	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Initial residue	Terminal residue	Strand sense
Strand 1	250	252	first strand
Strand 2	432	434	anti-parallel
Strand 3	417	419	anti-parallel
Strand 4	351	352	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Initial residue	Terminal residue	Strand sense
Strand 1	566	569	first strand
Strand 2	594	599	parallel
Strand 3	535	539	parallel
Strand 4	617	621	parallel
Strand 5	676	680	parallel
Strand 6	493	497	parallel
Strand 7	708	709	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	185	186	first strand
Strand 2	2	195	196	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	271	272	first strand
Strand 2	2	282	283	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	307	309	first strand
Strand 2	2	314	317	anti-parallel
Strand 3	2	341	345	anti-parallel
Strand 4	2	333	338	anti-parallel
Strand 5	7	59	60	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	402	405	first strand
Strand 2	5	8	11	anti-parallel
Strand 3	5	42	45	anti-parallel
Strand 4	5	34	39	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	431	435	first strand
Strand 2	2	440	443	anti-parallel
Strand 3	2	407	409	anti-parallel
Strand 4	5	4	5	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	21	23	first strand
Strand 2	3	59	61	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	69	71	first strand
Strand 2	4	59	61	anti-parallel
Strand 3	4	11	15	parallel
Strand 4	4	160	161	parallel
Strand 5	4	190	191	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	264	267	first strand
Strand 2	6	250	253	anti-parallel
Strand 3	6	311	312	parallel
Strand 4	6	303	304	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	113	121	first strand
Strand 2	6	103	110	anti-parallel
Strand 3	6	59	66	parallel
Strand 4	6	164	170	parallel
Strand 5	6	195	196	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	199	200	first strand
Strand 2	6	220	221	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	332	333	first strand
Strand 2	6	358	359	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	83	87	first strand
Strand 2	7	113	117	anti-parallel
Strand 3	7	105	108	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	271	272	first strand
Strand 2	7	174	178	anti-parallel
Strand 3	7	166	171	anti-parallel
Strand 4	7	291	292	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	268	269	first strand
Strand 2	Y	5	6	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	440	441	first strand
Strand 2	7	465	467	parallel
Strand 3	7	337	339	parallel
Strand 4	7	487	490	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	362	365	first strand
Strand 2	7	405	409	parallel
Strand 3	7	389	391	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	435	437	first strand
Strand 2	7	460	462	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	624	625	first strand
Strand 2	7	657	661	parallel
Strand 3	7	505	512	parallel
Strand 4	7	663	664	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	624	625	first strand
Strand 2	7	657	661	parallel
Strand 3	7	505	512	parallel
Strand 4	7	688	690	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	558	561	first strand
Strand 2	7	604	607	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7NVW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7NVW