Analysis of interatomic Contacts of Structural Units in PDB entry:
7NWU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7NWU entry

There are 8 chains in PDB entry 7NWU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 49	ASP 170
B	LYS 767	ASP 1016
C	ALA 49	THR 169
D	ARG 768	LYS 1017
E	LEU 50	THR 169
F	LYS 767	ASP 1016
G	LEU 50	ASP 170
H	ARG 768	LYS 1017

There are 77 helices in PDB entry 7NWU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	63	72	Right-handed alpha
Helix 2	AA2	A	104	115	Right-handed alpha
Helix 3	AA3	A	153	156	Right-handed 310
Helix 4	AA4	A	157	167	Right-handed alpha
Helix 5	AA5	B	769	781	Right-handed alpha
Helix 6	AA6	B	781	786	Right-handed alpha
Helix 7	AA7	B	787	796	Right-handed alpha
Helix 8	AA8	B	802	815	Right-handed alpha
Helix 9	AA9	B	816	819	Right-handed 310
Helix 10	AB1	B	820	822	Right-handed 310
Helix 11	AB2	B	823	835	Right-handed alpha
Helix 12	AB3	B	838	860	Right-handed alpha
Helix 13	AB4	B	861	863	Right-handed 310
Helix 14	AB5	B	864	881	Right-handed alpha
Helix 15	AB6	B	885	897	Right-handed alpha
Helix 16	AB7	B	916	930	Right-handed alpha
Helix 17	AB8	B	931	933	Right-handed 310
Helix 18	AB9	B	936	958	Right-handed alpha
Helix 19	AC1	B	969	984	Right-handed alpha
Helix 20	AC2	B	992	1012	Right-handed alpha
Helix 21	AC3	C	63	72	Right-handed alpha
Helix 22	AC4	C	104	115	Right-handed alpha
Helix 23	AC5	C	157	169	Right-handed alpha
Helix 24	AC6	D	769	781	Right-handed alpha
Helix 25	AC7	D	782	785	Right-handed 310
Helix 26	AC8	D	787	794	Right-handed alpha
Helix 27	AC9	D	802	815	Right-handed alpha
Helix 28	AD1	D	816	819	Right-handed 310
Helix 29	AD2	D	820	822	Right-handed 310
Helix 30	AD3	D	823	835	Right-handed alpha
Helix 31	AD4	D	838	860	Right-handed alpha
Helix 32	AD5	D	861	863	Right-handed 310
Helix 33	AD6	D	864	881	Right-handed alpha
Helix 34	AD7	D	885	899	Right-handed alpha
Helix 35	AD8	D	916	930	Right-handed alpha
Helix 36	AD9	D	931	933	Right-handed 310
Helix 37	AE1	D	936	958	Right-handed alpha
Helix 38	AE2	D	969	984	Right-handed alpha
Helix 39	AE3	D	992	1012	Right-handed alpha
Helix 40	AE4	E	63	72	Right-handed alpha
Helix 41	AE5	E	104	115	Right-handed alpha
Helix 42	AE6	E	157	168	Right-handed alpha
Helix 43	AE7	F	769	781	Right-handed alpha
Helix 44	AE8	F	781	786	Right-handed alpha
Helix 45	AE9	F	787	796	Right-handed alpha
Helix 46	AF1	F	802	815	Right-handed alpha
Helix 47	AF2	F	816	819	Right-handed 310
Helix 48	AF3	F	820	822	Right-handed 310
Helix 49	AF4	F	823	835	Right-handed alpha
Helix 50	AF5	F	838	860	Right-handed alpha
Helix 51	AF6	F	861	863	Right-handed 310
Helix 52	AF7	F	864	881	Right-handed alpha
Helix 53	AF8	F	885	899	Right-handed alpha
Helix 54	AF9	F	916	930	Right-handed alpha
Helix 55	AG1	F	931	933	Right-handed 310
Helix 56	AG2	F	936	958	Right-handed alpha
Helix 57	AG3	F	969	984	Right-handed alpha
Helix 58	AG4	F	992	1012	Right-handed alpha
Helix 59	AG5	G	63	72	Right-handed alpha
Helix 60	AG6	G	104	115	Right-handed alpha
Helix 61	AG7	G	157	169	Right-handed alpha
Helix 62	AG8	H	769	781	Right-handed alpha
Helix 63	AG9	H	781	786	Right-handed alpha
Helix 64	AH1	H	787	797	Right-handed alpha
Helix 65	AH2	H	802	815	Right-handed alpha
Helix 66	AH3	H	816	819	Right-handed 310
Helix 67	AH4	H	820	822	Right-handed 310
Helix 68	AH5	H	823	835	Right-handed alpha
Helix 69	AH6	H	838	860	Right-handed alpha
Helix 70	AH7	H	861	863	Right-handed 310
Helix 71	AH8	H	864	881	Right-handed alpha
Helix 72	AH9	H	885	899	Right-handed alpha
Helix 73	AI1	H	916	930	Right-handed alpha
Helix 74	AI2	H	931	933	Right-handed 310
Helix 75	AI3	H	935	958	Right-handed alpha
Helix 76	AI4	H	969	984	Right-handed alpha
Helix 77	AI5	H	992	1012	Right-handed alpha

There are 8 sheets in PDB entry 7NWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	84	first strand
Strand 2	A	95	101	anti-parallel
Strand 3	A	52	58	anti-parallel
Strand 4	A	130	133	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	120	first strand
Strand 2	A	126	128	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	84	first strand
Strand 2	C	95	101	anti-parallel
Strand 3	C	52	58	anti-parallel
Strand 4	C	130	133	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	120	first strand
Strand 2	C	126	128	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	77	84	first strand
Strand 2	E	95	101	anti-parallel
Strand 3	E	52	58	anti-parallel
Strand 4	E	130	133	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	118	120	first strand
Strand 2	E	126	128	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	77	84	first strand
Strand 2	G	95	101	anti-parallel
Strand 3	G	52	58	anti-parallel
Strand 4	G	130	133	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	118	120	first strand
Strand 2	G	126	128	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7NWU

Analysis of interatomic Contacts of Structural Units in PDB entry:
7NWU