Analysis of interatomic Contacts of Structural Units in PDB entry:
7NWZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7NWZ entry

There are 6 chains in PDB entry 7NWZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	ARG 92	GLU 149
F	PRO 679	LEU 985
E	PRO 679	LEU 985
B	ASP 678	GLY 986
A	ASP 678	GLY 986
C	ARG 92	GLU 149

There are 30 helices in PDB entry 7NWZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	93	103	Right-handed alpha
Helix 2	AA2	D	108	110	Right-handed 310
Helix 3	AA3	D	111	122	Right-handed alpha
Helix 4	AA4	D	127	129	Right-handed 310
Helix 5	AA5	D	130	143	Right-handed alpha
Helix 6	AA6	F	697	705	Right-handed alpha
Helix 7	AA7	F	717	721	Right-handed 310
Helix 8	AA8	F	787	795	Right-handed alpha
Helix 9	AA9	F	799	809	Right-handed alpha
Helix 10	AB1	F	895	899	Right-handed 310
Helix 11	AB2	E	697	705	Right-handed alpha
Helix 12	AB3	E	787	795	Right-handed alpha
Helix 13	AB4	E	799	809	Right-handed alpha
Helix 14	AB5	E	895	899	Right-handed 310
Helix 15	AB6	B	697	705	Right-handed alpha
Helix 16	AB7	B	717	721	Right-handed 310
Helix 17	AB8	B	787	795	Right-handed alpha
Helix 18	AB9	B	799	809	Right-handed alpha
Helix 19	AC1	B	895	899	Right-handed 310
Helix 20	AC2	A	697	705	Right-handed alpha
Helix 21	AC3	A	717	721	Right-handed 310
Helix 22	AC4	A	787	795	Right-handed alpha
Helix 23	AC5	A	799	809	Right-handed alpha
Helix 24	AC6	A	895	899	Right-handed 310
Helix 25	AC7	C	93	103	Right-handed alpha
Helix 26	AC8	C	108	110	Right-handed 310
Helix 27	AC9	C	111	122	Right-handed alpha
Helix 28	AD1	C	127	129	Right-handed 310
Helix 29	AD2	C	130	143	Right-handed alpha
Helix 30	AD3	C	144	149	Right-handed alpha

There are 8 sheets in PDB entry 7NWZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	683	685	first strand
Strand 2	F	978	982	anti-parallel
Strand 3	F	732	739	anti-parallel
Strand 4	F	756	765	anti-parallel
Strand 5	F	964	973	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	713	714	first strand
Strand 2	F	724	727	anti-parallel
Strand 3	F	770	774	anti-parallel
Strand 4	F	825	830	anti-parallel
Strand 5	F	835	841	anti-parallel
Strand 6	F	957	959	anti-parallel
Strand 7	F	861	862	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	683	685	first strand
Strand 2	E	979	981	anti-parallel
Strand 3	E	732	739	anti-parallel
Strand 4	E	756	765	anti-parallel
Strand 5	E	964	973	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	713	714	first strand
Strand 2	E	724	727	anti-parallel
Strand 3	E	770	774	anti-parallel
Strand 4	E	825	830	anti-parallel
Strand 5	E	835	841	anti-parallel
Strand 6	E	957	959	anti-parallel
Strand 7	E	861	862	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	684	685	first strand
Strand 2	B	979	982	anti-parallel
Strand 3	B	732	739	anti-parallel
Strand 4	B	756	765	anti-parallel
Strand 5	B	964	973	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	713	714	first strand
Strand 2	B	724	727	anti-parallel
Strand 3	B	770	774	anti-parallel
Strand 4	B	825	830	anti-parallel
Strand 5	B	835	841	anti-parallel
Strand 6	B	957	959	anti-parallel
Strand 7	B	861	862	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	683	685	first strand
Strand 2	A	979	983	anti-parallel
Strand 3	A	732	739	anti-parallel
Strand 4	A	756	765	anti-parallel
Strand 5	A	964	973	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	713	714	first strand
Strand 2	A	724	727	anti-parallel
Strand 3	A	770	774	anti-parallel
Strand 4	A	825	830	anti-parallel
Strand 5	A	835	841	anti-parallel
Strand 6	A	957	959	anti-parallel
Strand 7	A	861	862	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7NWZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7NWZ