Analysis of interatomic Contacts of Structural Units in PDB entry:
7NXG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NXG entry

There is 1 chain in PDB entry 7NXG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -4GLN 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 7NXG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 14Right-handed alpha
Helix 2
AA2
A
38 50Right-handed alpha
Helix 3
AA3
A
74 78Right-handed alpha
Helix 4
AA4
A
89 102Right-handed alpha
Helix 5
AA5
A
137 149Right-handed alpha
Helix 6
AA6
A
160 164Right-handed 310
Helix 7
AA7
A
243 254Right-handed alpha
Helix 8
AA8
A
256 276Right-handed alpha
Helix 9
AA9
A
316 331Right-handed alpha
Helix 10
AB1
A
339 352Right-handed alpha
Helix 11
AB2
A
431 451Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 7NXG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
66 69anti-parallel
Strand 3
A
60 63anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 83first strand
Strand 2
A
112 120parallel
Strand 3
A
124 132anti-parallel
Strand 4
A
22 30anti-parallel
Strand 5
A
388 396anti-parallel
Strand 6
A
384 385anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 242first strand
Strand 2
A
415 423anti-parallel
Strand 3
A
405 412anti-parallel
Strand 4
A
371 375parallel
Strand 5
A
285 289parallel
Strand 6
A
305 309anti-parallel
Strand 7
A
334 335anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il