Analysis of interatomic Contacts of Structural Units in PDB entry:
7NXP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NXP entry

There is 1 chain in PDB entry 7NXP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 465
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7NXP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 33Right-handed alpha
Helix 2
AA2
A
34 36Right-handed 310
Helix 3
AA3
A
41 53Right-handed alpha
Helix 4
AA4
A
54 61Right-handed alpha
Helix 5
AA5
A
72 85Right-handed alpha
Helix 6
AA6
A
97 113Right-handed alpha
Helix 7
AA7
A
122 129Right-handed alpha
Helix 8
AA8
A
129 147Right-handed alpha
Helix 9
AA9
A
187 196Right-handed alpha
Helix 10
AB1
A
209 219Right-handed alpha
Helix 11
AB2
A
225 239Right-handed alpha
Helix 12
AB3
A
248 270Right-handed alpha
Helix 13
AB4
A
283 289Right-handed alpha
Helix 14
AB5
A
318 327Right-handed alpha
Helix 15
AB6
A
327 335Right-handed alpha
Helix 16
AB7
A
339 344Right-handed alpha
Helix 17
AB8
A
344 358Right-handed alpha
Helix 18
AB9
A
386 397Right-handed alpha
Helix 19
AC1
A
401 426Right-handed alpha
Helix 20
AC2
A
428 441Right-handed alpha
Helix 21
AC3
A
445 456Right-handed alpha
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There are 2 sheets in PDB entry 7NXP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
15 17anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
460 461anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il