Analysis of interatomic Contacts of Structural Units in PDB entry:
7NY7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NY7 entry

There is 1 chain in PDB entry 7NY7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 180GLU 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 5 helices in PDB entry 7NY7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
203 207Right-handed 310
Helix 2
AA2
A
224 235Right-handed alpha
Helix 3
AA3
A
236 250Right-handed alpha
Helix 4
AA4
A
280 302Right-handed alpha
Helix 5
AA5
A
320 338Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 7NY7.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 190first strand
Strand 2
A
196 201anti-parallel
Strand 3
A
346 351parallel
Strand 4
A
306 310parallel
Strand 5
A
211 216parallel
Strand 6
A
269 274parallel
Strand 7
A
257 261anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il