Analysis of interatomic Contacts of Structural Units in PDB entry:
7NZ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7NZ7 entry

There are 2 chains in PDB entry 7NZ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 11PRO 176
B
 GLN 25PRO 349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7NZ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 21Right-handed alpha
Helix 2
AA2
A
21 38Right-handed alpha
Helix 3
AA3
A
61 66Right-handed alpha
Helix 4
AA4
A
71 87Right-handed alpha
Helix 5
AA5
A
90 96Right-handed alpha
Helix 6
AA6
A
107 117Right-handed alpha
Helix 7
AA7
A
159 172Right-handed alpha
Helix 8
AA8
B
35 39Right-handed 310
Helix 9
AA9
B
52 54Right-handed 310
Helix 10
AB1
B
55 67Right-handed alpha
Helix 11
AB2
B
105 110Right-handed alpha
Helix 12
AB3
B
135 143Right-handed alpha
Helix 13
AB4
B
168 191Right-handed alpha
Helix 14
AB5
B
223 235Right-handed alpha
Helix 15
AB6
B
289 300Right-handed alpha
Helix 16
AB7
B
338 343Right-handed alpha
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There are 3 sheets in PDB entry 7NZ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 59first strand
Strand 2
A
45 49anti-parallel
Strand 3
A
99 104anti-parallel
Strand 4
A
121 126parallel
Strand 5
A
153 155parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
332 335anti-parallel
Strand 3
B
303 308parallel
Strand 4
B
281 286parallel
Strand 5
B
196 200anti-parallel
Strand 6
B
207 212anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 82first strand
Strand 2
B
88 96anti-parallel
Strand 3
B
42 50anti-parallel
Strand 4
B
124 129anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il