Analysis of interatomic Contacts of Structural Units in PDB entry:
7O0G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O0G entry

There are 3 chains in PDB entry 7O0G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4VAL 749
E
 U 1 G 17
F
 C 1 G 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7O0G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 36Right-handed 310
Helix 2
AA2
A
104 115Right-handed alpha
Helix 3
AA3
A
119 133Right-handed alpha
Helix 4
AA4
A
172 187Right-handed alpha
Helix 5
AA5
A
217 222Right-handed alpha
Helix 6
AA6
A
233 240Right-handed alpha
Helix 7
AA7
A
255 259Right-handed 310
Helix 8
AA8
A
262 270Right-handed 310
Helix 9
AA9
A
289 302Right-handed alpha
Helix 10
AB1
A
321 340Right-handed alpha
Helix 11
AB2
A
344 348Right-handed 310
Helix 12
AB3
A
370 379Right-handed alpha
Helix 13
AB4
A
385 397Right-handed alpha
Helix 14
AB5
A
398 400Right-handed 310
Helix 15
AB6
A
405 420Right-handed alpha
Helix 16
AB7
A
428 444Right-handed alpha
Helix 17
AB8
A
489 494Right-handed alpha
Helix 18
AB9
A
496 517Right-handed alpha
Helix 19
AC1
A
530 535Right-handed alpha
Helix 20
AC2
A
544 556Right-handed alpha
Helix 21
AC3
A
640 659Right-handed alpha
Helix 22
AC4
A
669 686Right-handed alpha
Helix 23
AC5
A
698 712Right-handed alpha
Helix 24
AC6
A
729 748Right-handed alpha
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There are 7 sheets in PDB entry 7O0G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
56 65anti-parallel
Strand 3
A
68 77anti-parallel
Strand 4
A
29 32parallel
Strand 5
A
82 84anti-parallel
Strand 6
A
16 22parallel
Strand 7
A
8 13anti-parallel
Strand 8
A
56 65anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 192first strand
Strand 2
A
276 280anti-parallel
Strand 3
A
271 273anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 204first strand
Strand 2
A
212 215anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 311first strand
Strand 2
A
314 319anti-parallel
Strand 3
A
246 251anti-parallel
Strand 4
A
349 352anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 357first strand
Strand 2
A
360 362anti-parallel
Strand 3
A
367 369anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 487first strand
Strand 2
A
467 474anti-parallel
Strand 3
A
457 463anti-parallel
Strand 4
A
521 525parallel
Strand 5
A
561 564parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
627 637first strand
Strand 2
A
613 621anti-parallel
Strand 3
A
593 600anti-parallel
Strand 4
A
663 666parallel
Strand 5
A
715 717parallel
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