Analysis of interatomic Contacts of Structural Units in PDB entry:
7O0H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7O0H entry

There are 4 chains in PDB entry 7O0H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 5	LEU 571
B	THR 3	VAL 578
E	A 1	C 15
F	G 1	G 13

There are 43 helices in PDB entry 7O0H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	36	Right-handed 310
Helix 2	AA2	A	85	89	Right-handed 310
Helix 3	AA3	A	104	115	Right-handed alpha
Helix 4	AA4	A	119	133	Right-handed alpha
Helix 5	AA5	A	170	172	Right-handed 310
Helix 6	AA6	A	173	187	Right-handed alpha
Helix 7	AA7	A	217	223	Right-handed alpha
Helix 8	AA8	A	233	241	Right-handed alpha
Helix 9	AA9	A	255	259	Right-handed 310
Helix 10	AB1	A	262	270	Right-handed 310
Helix 11	AB2	A	289	302	Right-handed alpha
Helix 12	AB3	A	321	340	Right-handed alpha
Helix 13	AB4	A	370	379	Right-handed alpha
Helix 14	AB5	A	385	398	Right-handed alpha
Helix 15	AB6	A	399	403	Right-handed 310
Helix 16	AB7	A	405	410	Right-handed alpha
Helix 17	AB8	A	410	415	Right-handed alpha
Helix 18	AB9	A	415	420	Right-handed alpha
Helix 19	AC1	A	428	444	Right-handed alpha
Helix 20	AC2	A	489	494	Right-handed alpha
Helix 21	AC3	A	496	517	Right-handed alpha
Helix 22	AC4	A	529	535	Right-handed alpha
Helix 23	AC5	A	544	557	Right-handed alpha
Helix 24	AC6	B	32	37	Right-handed 310
Helix 25	AC7	B	85	89	Right-handed 310
Helix 26	AC8	B	104	115	Right-handed alpha
Helix 27	AC9	B	119	133	Right-handed alpha
Helix 28	AD1	B	170	172	Right-handed 310
Helix 29	AD2	B	173	187	Right-handed alpha
Helix 30	AD3	B	217	222	Right-handed alpha
Helix 31	AD4	B	254	259	Right-handed 310
Helix 32	AD5	B	262	270	Right-handed 310
Helix 33	AD6	B	289	302	Right-handed alpha
Helix 34	AD7	B	321	340	Right-handed alpha
Helix 35	AD8	B	385	396	Right-handed alpha
Helix 36	AD9	B	397	401	Right-handed 310
Helix 37	AE1	B	405	420	Right-handed alpha
Helix 38	AE2	B	428	445	Right-handed alpha
Helix 39	AE3	B	489	494	Right-handed alpha
Helix 40	AE4	B	496	517	Right-handed alpha
Helix 41	AE5	B	528	535	Right-handed alpha
Helix 42	AE6	B	537	541	Right-handed 310
Helix 43	AE7	B	546	556	Right-handed alpha

There are 14 sheets in PDB entry 7O0H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	32	first strand
Strand 2	A	68	77	parallel
Strand 3	A	55	65	anti-parallel
Strand 4	A	43	46	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	32	first strand
Strand 2	A	68	77	parallel
Strand 3	A	55	65	anti-parallel
Strand 4	A	9	13	anti-parallel
Strand 5	A	16	22	anti-parallel
Strand 6	A	82	84	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	190	192	first strand
Strand 2	A	276	280	anti-parallel
Strand 3	A	271	273	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	205	first strand
Strand 2	A	211	212	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	311	first strand
Strand 2	A	314	319	anti-parallel
Strand 3	A	246	252	anti-parallel
Strand 4	A	343	352	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	355	357	first strand
Strand 2	A	360	362	anti-parallel
Strand 3	A	367	369	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	483	487	first strand
Strand 2	A	467	474	anti-parallel
Strand 3	A	457	463	anti-parallel
Strand 4	A	521	525	parallel
Strand 5	A	560	564	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	70	first strand
Strand 2	B	63	65	anti-parallel
Strand 3	B	9	12	anti-parallel
Strand 4	B	17	22	anti-parallel
Strand 5	B	82	84	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	31	first strand
Strand 2	B	74	76	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	190	192	first strand
Strand 2	B	276	280	anti-parallel
Strand 3	B	271	273	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	205	first strand
Strand 2	B	211	215	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	309	311	first strand
Strand 2	B	314	319	anti-parallel
Strand 3	B	246	251	anti-parallel
Strand 4	B	349	352	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	355	357	first strand
Strand 2	B	360	362	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	486	487	first strand
Strand 2	B	467	472	anti-parallel
Strand 3	B	457	463	anti-parallel
Strand 4	B	521	525	parallel
Strand 5	B	560	564	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7O0H

Analysis of interatomic Contacts of Structural Units in PDB entry:
7O0H