Analysis of interatomic Contacts of Structural Units in PDB entry:
7O17


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O17 entry

There are 5 chains in PDB entry 7O17 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 28GLU 430
B
 ASN 2GLY 299
C
 ASN 2GLY 299
D
 ASN 2ARG 274
E
 ASN 2ARG 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 7O17. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
375 383Right-handed alpha
Helix 2
AA2
A
385 391Right-handed alpha
Helix 3
AA3
A
392 405Right-handed alpha
Helix 4
AA4
A
424 429Right-handed 310
Helix 5
AA5
B
41 50Right-handed alpha
Helix 6
AA6
B
90 103Right-handed alpha
Helix 7
AA7
B
108 116Right-handed alpha
Helix 8
AA8
B
118 122Right-handed 310
Helix 9
AA9
B
125 129Right-handed 310
Helix 10
AB1
B
130 143Right-handed alpha
Helix 11
AB2
B
160 173Right-handed alpha
Helix 12
AB3
B
190 194Right-handed 310
Helix 13
AB4
B
211 219Right-handed alpha
Helix 14
AB5
B
233 241Right-handed alpha
Helix 15
AB6
B
267 275Right-handed alpha
Helix 16
AB7
B
286 296Right-handed alpha
Helix 17
AB8
C
41 50Right-handed alpha
Helix 18
AB9
C
62 65Right-handed 310
Helix 19
AC1
C
72 74Right-handed 310
Helix 20
AC2
C
90 103Right-handed alpha
Helix 21
AC3
C
105 117Right-handed alpha
Helix 22
AC4
C
125 129Right-handed 310
Helix 23
AC5
C
130 143Right-handed alpha
Helix 24
AC6
C
160 176Right-handed alpha
Helix 25
AC7
C
190 194Right-handed 310
Helix 26
AC8
C
211 219Right-handed alpha
Helix 27
AC9
C
237 242Right-handed alpha
Helix 28
AD1
C
266 272Right-handed alpha
Helix 29
AD2
C
287 298Right-handed alpha
Helix 30
AD3
D
4 18Right-handed alpha
Helix 31
AD4
D
23 36Right-handed alpha
Helix 32
AD5
D
51 62Right-handed alpha
Helix 33
AD6
D
64 75Right-handed alpha
Helix 34
AD7
D
78 83Right-handed alpha
Helix 35
AD8
D
86 91Right-handed alpha
Helix 36
AD9
D
98 120Right-handed alpha
Helix 37
AE1
D
120 130Right-handed alpha
Helix 38
AE2
D
135 168Right-handed alpha
Helix 39
AE3
D
170 185Right-handed alpha
Helix 40
AE4
D
187 197Right-handed alpha
Helix 41
AE5
D
209 216Right-handed 310
Helix 42
AE6
D
217 226Right-handed alpha
Helix 43
AE7
D
238 243Right-handed alpha
Helix 44
AE8
D
248 273Right-handed alpha
Helix 45
AE9
E
3 15Right-handed alpha
Helix 46
AF1
E
18 23Right-handed alpha
Helix 47
AF2
E
23 36Right-handed alpha
Helix 48
AF3
E
52 72Right-handed alpha
Helix 49
AF4
E
78 85Right-handed alpha
Helix 50
AF5
E
86 93Right-handed alpha
Helix 51
AF6
E
96 120Right-handed alpha
Helix 52
AF7
E
120 128Right-handed alpha
Helix 53
AF8
E
135 142Right-handed alpha
Helix 54
AF9
E
143 166Right-handed alpha
Helix 55
AG1
E
172 177Right-handed alpha
Helix 56
AG2
E
177 187Right-handed alpha
Helix 57
AG3
E
188 200Right-handed alpha
Helix 58
AG4
E
248 257Right-handed alpha
Helix 59
AG5
E
257 272Right-handed alpha
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There are 12 sheets in PDB entry 7O17. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
63 65parallel
Strand 3
A
89 91parallel
Strand 4
A
119 121parallel
Strand 5
A
141 143parallel
Strand 6
A
170 173parallel
Strand 7
A
192 195parallel
Strand 8
A
215 217parallel
Strand 9
A
237 239parallel
Strand 10
A
259 262parallel
Strand 11
A
296 299parallel
Strand 12
A
319 322parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 53first strand
Strand 2
A
70 73parallel
Strand 3
A
93 96parallel
Strand 4
A
123 125parallel
Strand 5
A
146 148parallel
Strand 6
A
176 178parallel
Strand 7
A
198 200parallel
Strand 8
A
220 222parallel
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There are 12 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
81 83parallel
Strand 3
A
107 111parallel
Strand 4
A
130 133parallel
Strand 5
A
162 163parallel
Strand 6
A
184 187parallel
Strand 7
A
204 209parallel
Strand 8
A
226 231parallel
Strand 9
A
249 254parallel
Strand 10
A
286 291parallel
Strand 11
A
308 311parallel
Strand 12
A
331 334parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 244first strand
Strand 2
A
265 267parallel
Strand 3
A
302 304parallel
Strand 4
A
325 327parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 24first strand
Strand 2
B
4 13anti-parallel
Strand 3
B
60 62anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 79first strand
Strand 2
B
150 153parallel
Strand 3
B
181 184parallel
Strand 4
B
31 35parallel
Strand 5
B
197 200parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 226first strand
Strand 2
B
281 283anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 248first strand
Strand 2
B
256 257anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 24first strand
Strand 2
C
6 9anti-parallel
Strand 3
C
59 60anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 13first strand
Strand 2
C
16 17anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
76 79first strand
Strand 2
C
149 153parallel
Strand 3
C
180 184parallel
Strand 4
C
31 35parallel
Strand 5
C
197 200parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
246 250first strand
Strand 2
C
254 259anti-parallel
Strand 3
C
223 228anti-parallel
Strand 4
C
279 283anti-parallel
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