Analysis of interatomic Contacts of Structural Units in PDB entry:
7O1P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O1P entry

There is 1 chain in PDB entry 7O1P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2PRO 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7O1P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 12Right-handed alpha
Helix 2
AA2
A
16 26Right-handed alpha
Helix 3
AA3
A
28 48Right-handed alpha
Helix 4
AA4
A
85 99Right-handed alpha
Helix 5
AA5
A
111 115Right-handed 310
Helix 6
AA6
A
116 127Right-handed alpha
Helix 7
AA7
A
128 130Right-handed 310
Helix 8
AA8
A
141 151Right-handed alpha
Helix 9
AA9
A
164 172Right-handed alpha
Helix 10
AB1
A
176 190Right-handed alpha
Helix 11
AB2
A
206 221Right-handed alpha
Helix 12
AB3
A
245 260Right-handed alpha
Helix 13
AB4
A
268 275Right-handed alpha
Helix 14
AB5
A
277 284Right-handed alpha
Helix 15
AB6
A
298 303Right-handed alpha
Helix 16
AB7
A
318 330Right-handed alpha
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There are 3 sheets in PDB entry 7O1P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
289 290parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 60first strand
Strand 2
A
103 108parallel
Strand 3
A
132 136parallel
Strand 4
A
155 157parallel
Strand 5
A
193 196parallel
Strand 6
A
224 225parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 200first strand
Strand 2
A
228 229parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il