Analysis of interatomic Contacts of Structural Units in PDB entry:
7O1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O1V entry

There are 2 chains in PDB entry 7O1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 13GLY 751
B
 THR 3LYS 542
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 7O1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 54Right-handed alpha
Helix 2
AA2
A
64 97Right-handed alpha
Helix 3
AA3
A
99 105Right-handed alpha
Helix 4
AA4
A
122 126Right-handed 310
Helix 5
AA5
A
142 151Right-handed alpha
Helix 6
AA6
A
154 182Right-handed alpha
Helix 7
AA7
A
192 203Right-handed alpha
Helix 8
AA8
A
203 219Right-handed alpha
Helix 9
AA9
A
219 228Right-handed alpha
Helix 10
AB1
A
238 245Right-handed alpha
Helix 11
AB2
A
245 253Right-handed alpha
Helix 12
AB3
A
255 259Right-handed 310
Helix 13
AB4
A
260 265Right-handed alpha
Helix 14
AB5
A
269 274Right-handed 310
Helix 15
AB6
A
289 308Right-handed alpha
Helix 16
AB7
A
320 327Right-handed alpha
Helix 17
AB8
A
339 347Right-handed alpha
Helix 18
AB9
A
347 371Right-handed alpha
Helix 19
AC1
A
382 414Right-handed alpha
Helix 20
AC2
A
424 432Right-handed alpha
Helix 21
AC3
A
432 450Right-handed alpha
Helix 22
AC4
A
451 464Right-handed alpha
Helix 23
AC5
A
466 470Right-handed 310
Helix 24
AC6
A
480 497Right-handed alpha
Helix 25
AC7
A
528 555Right-handed alpha
Helix 26
AC8
A
564 569Right-handed alpha
Helix 27
AC9
A
586 616Right-handed alpha
Helix 28
AD1
A
634 639Right-handed alpha
Helix 29
AD2
A
642 649Right-handed alpha
Helix 30
AD3
A
650 659Right-handed alpha
Helix 31
AD4
A
665 688Right-handed alpha
Helix 32
AD5
A
690 708Right-handed alpha
Helix 33
AD6
A
719 749Right-handed alpha
Helix 34
AD7
B
9 13Right-handed 310
Helix 35
AD8
B
18 27Right-handed alpha
Helix 36
AD9
B
38 71Right-handed alpha
Helix 37
AE1
B
73 80Right-handed alpha
Helix 38
AE2
B
97 105Right-handed alpha
Helix 39
AE3
B
119 128Right-handed alpha
Helix 40
AE4
B
131 156Right-handed alpha
Helix 41
AE5
B
157 162Right-handed 310
Helix 42
AE6
B
164 170Right-handed alpha
Helix 43
AE7
B
170 181Right-handed alpha
Helix 44
AE8
B
183 197Right-handed alpha
Helix 45
AE9
B
197 204Right-handed alpha
Helix 46
AF1
B
222 227Right-handed alpha
Helix 47
AF2
B
229 233Right-handed 310
Helix 48
AF3
B
269 288Right-handed alpha
Helix 49
AF4
B
300 308Right-handed alpha
Helix 50
AF5
B
320 325Right-handed alpha
Helix 51
AF6
B
327 351Right-handed alpha
Helix 52
AF7
B
362 395Right-handed alpha
Helix 53
AF8
B
404 444Right-handed alpha
Helix 54
AF9
B
445 450Right-handed 310
Helix 55
AG1
B
455 465Right-handed alpha
Helix 56
AG2
B
490 499Right-handed alpha
Helix 57
AG3
B
510 537Right-handed alpha
Helix 58
AG4
B
546 551Right-handed alpha
Helix 59
AG5
B
568 601Right-handed alpha
Helix 60
AG6
B
602 610Right-handed alpha
Helix 61
AG7
B
612 619Right-handed alpha
Helix 62
AG8
B
622 624Right-handed 310
Helix 63
AG9
B
625 630Right-handed alpha
Helix 64
AH1
B
640 663Right-handed alpha
Helix 65
AH2
B
664 682Right-handed alpha
Helix 66
AH3
B
698 730Right-handed alpha
Helix 67
AH4
C
15 21Right-handed alpha
Helix 68
AH5
C
44 48Right-handed 310
Helix 69
AH6
C
53 58Right-handed alpha
Helix 70
AH7
C
73 78Right-handed alpha
Helix 71
AH8
D
19 25Right-handed alpha
Helix 72
AH9
D
61 74Right-handed alpha
Helix 73
AI1
D
121 125Right-handed 310
Helix 74
AI2
D
127 131Right-handed 310
Helix 75
AI3
E
62 64Right-handed 310
Helix 76
AI4
K
26 39Right-handed alpha
Helix 77
AI5
K
62 85Right-handed alpha
Helix 78
AI6
M
4 29Right-handed alpha
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There are 9 sheets in PDB entry 7O1V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
183 185anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
135 138anti-parallel
Strand 3
A
128 129anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
514 515first strand
Strand 2
A
520 522anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
620 621first strand
Strand 2
A
627 628anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 7first strand
Strand 2
C
65 68anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 30first strand
Strand 2
C
38 41anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 59first strand
Strand 2
D
27 34anti-parallel
Strand 3
D
84 88anti-parallel
Strand 4
D
94 98anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 41first strand
Strand 2
D
47 49anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
58 61first strand
Strand 2
E
37 40anti-parallel
Strand 3
E
22 28anti-parallel
Strand 4
E
8 11anti-parallel
Strand 5
E
66 68anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il