Analysis of interatomic Contacts of Structural Units in PDB entry:
7O2S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7O2S entry

There is 1 chain in PDB entry 7O2S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 24ARG 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7O2S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 35Right-handed 310
Helix 2
AA2
A
36 41Right-handed alpha
Helix 3
AA3
A
41 46Right-handed alpha
Helix 4
AA4
A
56 60Right-handed 310
Helix 5
AA5
A
153 158Right-handed alpha
Helix 6
AA6
A
178 181Right-handed 310
Helix 7
AA7
A
182 188Right-handed alpha
Helix 8
AA8
A
189 193Right-handed 310
Helix 9
AA9
A
210 216Right-handed alpha
Helix 10
AB1
A
251 260Right-handed alpha
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There are 3 sheets in PDB entry 7O2S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
131 132parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
294 296parallel
Strand 3
A
223 228anti-parallel
Strand 4
A
239 244anti-parallel
Strand 5
A
164 173parallel
Strand 6
A
139 147anti-parallel
Strand 7
A
111 120anti-parallel
Strand 8
A
90 93anti-parallel
Strand 9
A
81 85anti-parallel
Strand 10
A
203 206anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
99 102anti-parallel
Strand 3
A
111 120anti-parallel
Strand 4
A
139 147anti-parallel
Strand 5
A
164 173anti-parallel
Strand 6
A
248 250parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il